Chenopodium quinoa (quinoa): 110688212
Help
Entry
110688212 CDS
T05764
Name
(RefSeq) probable pectate lyase 4 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi00040
Pentose and glucuronate interconversions
cqi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110688212
Enzymes [BR:
cqi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
110688212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
110688212
NCBI-ProteinID:
XP_021720622
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MASKFVSLLIFSFLLAMVPKTCLGKKSGLATFNAIDVCWRRNPNWVNSREDIAKCSAGFA
GKMINNIGKDVNKYVVTDPSDNAMSPKAGTLRYGMTMVPGKVWISFQKDMEIKLERTLVV
GSYTTIDGRGAIVHITNGCLLLYKVTNVIIHGLRIHHCRSQPASSVMGPGAKLLPMSKMD
GDAIRMLGSTKVWIDHNTLYRSEDGLIDVTLGSTNITISNNWFRDHNKVMLLGHDDDFKD
DKNMKVTVVYNRFGPNCHQRMPRVRHGYAHVANNLYLGWEVYAIGGSMSPSIKSESNLFV
APNSGSKQVNSFAPLEWLILDIHKSSNAGKGIWNFKSVGDVLENGASFNETGSGFVKPNY
NNEERFPVESGRIVRQLTRSAGALRCQGGSIC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaaatttgtatctttgctcattttctcttttttactagccatggtaccaaaa
acatgtttgggtaagaaatccggccttgcaacgtttaatgccattgatgtttgttggcga
cgaaaccctaattgggttaatagtagggaagatattgcaaaatgctcggcgggttttgca
ggtaaaatgattaataacattggcaaagatgtgaacaaatatgtagtcactgatcctagt
gataatgcaatgagcccgaaagcgggaactcttcggtatggaatgactatggtaccgggg
aaagtatggatctcatttcaaaaagacatggagattaaacttgaaaggactcttgttgtt
ggtagttatacaaccattgatggtagaggtgctatcgttcatatcactaatggatgcctc
ttgctatacaaggttactaatgtgatcatccacgggttgcgaattcaccattgtcgatcc
caaccagcaagctcggttatgggacctggtgcaaagttgttgccaatgagcaaaatggac
ggcgatgccataagaatgcttggctcaacaaaggtgtggatagaccacaataccctctac
aggagcgaagatggcctcatcgatgtaacccttgggtcaaccaacattaccatctccaac
aactggtttcgcgaccacaacaaggtcatgctactaggccatgatgatgatttcaaggac
gacaagaacatgaaggtcacggttgtctacaaccgatttggccccaactgccaccagcgt
atgccaagagttcgtcatggttatgctcatgtagctaacaacttatatctaggatgggaa
gtttatgccataggaggaagcatgagcccaagcataaagagcgaatctaacctctttgtc
gctcctaattctggatcgaaacaagtaaattcttttgctccattagagtggcttatctta
gacatacataaatcaagtaatgctggaaaagggatatggaactttaaatcagtgggagat
gtcttagaaaatggagcttctttcaacgaaaccggttcgggttttgtaaaaccaaactac
aacaatgaagaaagatttcccgtcgaaagtggtaggattgtaaggcaacttacaagatca
gctggggctctacgttgccaaggaggatcaatctgctaa
DBGET
integrated database retrieval system
