Chenopodium quinoa (quinoa): 110699110
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Entry
110699110 CDS
T05764
Name
(RefSeq) tetratricopeptide repeat protein SKI3-like
KO
K12600
superkiller protein 3
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110699110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110699110
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
110699110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_17
TPR_14
TPR_12
TPR_8
TPR_16
TPR_9
TPR_CcmH_CycH
TPR_19
TPR_7
ARM_TT21_C
BTAD
DUF6584
TPR_NPHP3
ARM_TT21_4th
NTF2
Motif
Other DBs
NCBI-GeneID:
110699110
NCBI-ProteinID:
XP_021732291
LinkDB
All DBs
Position
Unknown
AA seq
1164 aa
AA seq
DB search
MNVTELKTLEELADSHPDDPSHHFNLGKLIWERGEEWREKAAEHFLKAAKLNPQNGEAFR
FLGHYYSCVCLDTQRALKCYQRAVTLNPDDSQSGEALCDLLDKSGKESLEIAVCREAFGK
SPRAFWAFSRLGLLMVHQNKWSEAVQSLQHAIRGYPTCADLWEALGLAYQRLGMYTAAIK
SYGRAMELENSKAFSMIETGNIFLMLGSYRKGIEQFQHALEICPQSACAQYGLASGLLAL
SQECIKQGAYSWATSLLEEASEVAKNSAVLTSNMSCVWKLHADIQLTYAKSFPWTEGGNL
KGEEAFSRSLLSWKNTRQIAAVSAKCSYQRALHLAPWQANIYMDVSVALDHVCSLQGSRE
TDLSSWKISEKMLLGSLLLEGDNHEFWMALGCMSDHRALRQHAFIRGLHLDVSLASAWAY
LGKLYKEEGESQLGRQAFDRARSIDPSLSLPWAGMSADTIIRETASDEAYDSCLRAVQIL
SLAEFQIGLAKLALRSNNLLSSEVFGSIRQALQCAPWYPESHNLNGLVSEARHDYQSAIV
SYQLARYAWKTSTLSLPHSHFVDISINLARALCKAENVLEAVQELEDLKERGFLDVEGLQ
VYAISLWKLGKNDMSLSAAKDLATCVPTMKLSTAGASISLICCLLYSISGVGSTINNILQ
MPRELLQSAKVSFIISAVDAVDQSCQLQALVSSSRLILSTQEEIMEMHLLIGLSKLIRNG
DGHSLGLQSGIDHLRKALHMYPNGISLRNMLGYLLLSRKQWENDHVVRRCCAVVPFNSIK
QDFRSAHEIIGAEAVACHATYSCKPKYSLSTCKYQNVHGASLMGLMQRWLRLEPWNHNAR
YFLVLNLLQTACQAKYPQHLLNVLKRMTSVALTSQLSLNKTFERYKRFQLLLCSSELNLL
GGDMSNSVSLARDASNLSLSDAYTFFAHLQLCRAHAAEDNQTSLNVEFTKCLKLKTDYPI
GWISLKIIESRHRPQNGSTFLDSGFRDSIKEIKESENSWLAVYKLFCGLVSQWAQDFLRA
EEFLAEACSLAPTESCFFLCHGAICMELTKMQYGSQYLTMGIRSLKKAQGMSSIQLPFVS
LLLAQAEASLGSKWKWDSNLQLEWYSWSPETRPAELYFQMHLLALGSGTTSSQDYGDPLN
WVLRAIHLNPSCLRYWRVLCKLAE
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttacggaattgaaaaccctcgaagaactcgcggattctcacccagatgaccct
tcccaccattttaatcttgggaaattgatttgggaaagaggagaagaatggagagagaaa
gctgcagagcattttctgaaggcagctaaattgaatccccaaaatggggaagcattcaga
tttttaggtcattactatagttgtgtttgtttggatacccagagagctctcaaatgctac
cagcgtgctgttacgcttaatcccgatgattcgcagtccggggaagcattgtgtgattta
ctggacaaaagtgggaaggagagcttagagattgctgtgtgcagggaggcgttcgggaag
tcaccccgtgccttttgggcattttccagactaggtttgctgatggtgcatcaaaacaag
tggtctgaggctgttcagagtcttcagcatgccatcagaggctacccaacctgtgccgat
ctctgggaagcgttaggtcttgcctatcaacgacttggcatgtatactgctgccattaag
tcttacgggagagcaatggaattggaaaattcaaaagccttttctatgattgagactgga
aatatttttctaatgcttggttcatatcggaagggaattgagcaatttcaacatgctcta
gagatatgccctcaaagtgcatgtgcacagtatgggctggcttctgggcttcttgctcta
tcacaagaatgcattaagcagggtgcatattcatgggcaacatctctattggaggaggca
tctgaagttgcaaaaaatagtgctgttttgaccagtaatatgtcatgtgtatggaagcta
catgctgatatacagcttacttatgcaaaatcatttccatggacagaaggtggtaatctg
aagggcgaggaagccttttctaggtctcttctttcctggaaaaatacacggcaaatagct
gctgtgtcagccaaatgttcctaccagcgtgctctgcacttagctccatggcaagcaaac
atatatatggatgtttctgtggctcttgatcatgtttgctctttacaggggagtcgtgaa
actgatctgagctcctggaaaatatctgagaagatgctgttaggaagcttgctacttgag
ggtgacaatcatgaattttggatggcattgggatgcatgtctgatcatagggcattgaga
caacatgcctttatccgagggttgcatttggatgtatctctagcttctgcttgggcttat
ctcggcaagctatacaaagaagaaggtgaaagccaattgggaagacaagcctttgacagg
gctcgaagtatagatccttctctttcattgccatgggctggcatgtcagcagatacgatt
atcagggaaactgcatcagatgaggcttacgacagttgcttacgagccgttcaaatattg
tctctcgctgagtttcaaattggtctcgcaaaacttgctctacgttcaaacaacctatta
tcttcagaggtatttggatctatcaggcaagcgttgcagtgtgctccttggtatcctgag
tctcataatctgaatgggctagtttctgaggcacgacatgattatcaatctgctatcgtt
tcttatcagctagcacgttatgcatggaagacttctacactttccttgccccattctcat
tttgttgatatatcaattaatctggctagggcactctgcaaggcagaaaatgtactagaa
gctgtgcaagaattggaagatctgaaggaaagaggttttcttgacgttgaaggccttcaa
gtatatgctatatcattatggaaacttggcaagaatgatatgtccctatctgctgctaaa
gatcttgctacatgtgttcccaccatgaagctgtccactgcaggggcatctatttctttg
atttgctgtcttctgtactccatttccggggtaggatcaactatcaataacattttgcaa
atgcctagggagctgcttcagagtgcaaaagtcagtttcatcatatctgctgtagatgct
gttgatcagagctgtcaattacaggctttagtctcaagtagccgccttatcctttcaaca
caggaagagattatggaaatgcatttgctgattggactaagtaaactaataagaaatgga
gatggacattctctcggtttacaaagtggcatagatcatcttagaaaggcgttgcatatg
taccccaatggaatttctttaagaaatatgctcggatatcttttgttatctcgcaaacaa
tgggaaaacgaccatgttgtaaggaggtgctgtgctgttgttccgtttaactcaataaag
caagacttcagatctgcacatgaaattattggtgccgaagctgttgcttgtcatgctact
tacagctgcaaaccgaaatactctctttcaacatgtaagtaccagaatgtgcatggtgca
tcactgatggggttaatgcagagatggcttcggcttgaaccgtggaaccataatgcaaga
tactttctagtacttaatttgcttcaaacagcatgccaagcaaaatatccgcaacacctt
ttgaatgtgctcaagcggatgacttctgtagctctcacgagtcagttatctttgaataag
acatttgaaagatataaaagatttcagctgcttctgtgttcctctgagctcaatttgctt
ggtggagatatgtcaaacagtgtttctcttgcaagggatgcatcaaacctttcgctttct
gatgcctataccttttttgcccatttgcaattatgccgcgctcatgctgctgaagataac
cagacaagtctcaatgtagagtttacaaagtgcttgaagcttaaaactgattaccctatt
ggttggattagtcttaagattattgaatctcgtcatagaccccagaatggttccactttt
ttagattcaggctttagagatagtattaaagagatcaaggagtcagagaattcatggttg
gctgtctacaaactgttttgtggtttagtttctcaatgggctcaagattttctacgtgca
gaggagttccttgctgaagcgtgttcactagcacctactgagagctgcttcttcctgtgc
catggtgctatctgcatggagcttacaaaaatgcaatacggctctcagtatctgacaatg
ggtataagaagtcttaaaaaggctcaagggatgtcctccattcaattgccatttgtttcc
cttttgctagctcaagcagaggcaagccttggatcaaaatggaagtgggatagtaacctc
caattggaatggtattcttggtcaccagagacgagacctgctgaactctattttcaaatg
catctgcttgcacttgggtctggaaccacatctagtcaagattatggagatccgctcaac
tgggttcttcgagctattcacttgaatccttcttgcttgaggtattggagagtcctgtgc
aagcttgctgagtga
DBGET
integrated database retrieval system
