Chenopodium quinoa (quinoa): 110738990
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Entry
110738990 CDS
T05764
Name
(RefSeq) exosome complex component RRP45A-like isoform X1
KO
K03678
exosome complex component RRP45
Organism
cqi
Chenopodium quinoa (quinoa)
Pathway
cqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110738990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqi03019
]
110738990
Messenger RNA biogenesis [BR:
cqi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
110738990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
110738990
NCBI-ProteinID:
XP_021775125
UniProt:
A0A803MZD0
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MEQRLANTWHMSINEKKFIETALLSDLRADGRCPFDYRKLTIKFGRKDGSTEVQLGQTHV
MSFVTAQLVQPYRDRPNEGSLNIFTEFSPMADPSFEAGRPGESAIELGRIIDRGLRESRA
VDTESLCVLAGKLVWSVRLDLHILDNGGNLLDAANVAALASLMTFRRPVCTLGGEDGQEV
VVHPPEVQEPLPLIVHHLPIAVTFGFMTENILVVDPTYYEEAVMKGKLTATINASEDVCA
IQKAGEIGVAPSVVMQCLRIAAAKAADMTSKIENAVKLFNTDREQQSVKRLSSVALLNIS
TPISSTINDNSHSICEQTTVLQQMRKSACQERYASERNVMKTEEPSCRREVDATTEAKRL
MKGPSCWDPFSRGVDSKHLKASLVSCGKLMEKRENEQIVKGKLMDSDSAEILEQRNPIAF
ATIATDVISNSREIKTLQDAVKPKSKRKKFSASKSSN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaacagagactagctaatacttggcacatgtctataaatgagaagaagtttatagag
actgcattgctttcagatcttagagctgatggaaggtgcccatttgactaccgcaaatta
acaattaagttcggtaggaaagacggatcaactgaggtacagcttggccagactcatgtc
atgagctttgtcactgctcagctagttcaaccttatagagacaggccaaatgaaggatca
cttaatatattcacagagttttcacctatggctgacccgtcatttgaggctggtcgccct
ggagagtcagcgatagagttgggacgcataatagaccgtggtctgagggagagcagggca
gttgatactgaatcactttgtgttctagctggcaagttagtatggtctgtccgtctcgat
cttcacattcttgataatggaggaaatcttctcgatgctgcaaatgttgctgctttggca
tctctgatgacatttcgacggcctgtatgtactcttggaggagaagatggtcaggaagta
gttgtgcatccaccagaggtgcaggaaccacttccattgatagttcaccatcttcctata
gctgtgacatttggatttatgactgaaaacattttggtggtagatcctacttattacgaa
gaggctgttatgaaaggaaaattgacagctacaattaatgcaagtgaagatgtttgtgcc
attcaaaaggctggagaaattggcgtcgccccaagtgttgttatgcaatgtttgcgaatt
gctgctgcgaaagctgctgatatgaccagcaagattgaaaatgcggtcaaattgttcaac
actgatcgagaacagcaaagtgtgaagcgcctctcttctgtggcgttactgaatattagt
acaccgatttcaagtactatcaatgacaacagccattctatttgtgaacaaaccactgta
ttacagcaaatgcggaagtcagcatgccaagaacgttatgctagtgaaagaaatgttatg
aaaactgaagaaccttcatgtagaagagaggtagatgcaactactgaagctaagaggctc
atgaagggtccttcttgttgggatcccttttccagaggtgtggattcgaaacatctgaaa
gcttctcttgtgtcttgtggtaaactaatggagaaaagggagaacgaacaaattgttaaa
ggcaagttaatggactcggactccgctgagatactagagcaaaggaatccaatagcattt
gctacaatagctactgatgtgatatcaaattctcgtgagattaagaccctacaagatgct
gtaaaaccaaaatccaagagaaagaagttttctgcttcgaagagttcgaactga
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