Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ000183
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Entry
CpipJ_CPIJ000183 CDS
T01079
Name
(GenBank) pre-mRNA cleavage complex II protein Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cqu
Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cqu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CpipJ_CPIJ000183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cqu03019
]
CpipJ_CPIJ000183
Enzymes [BR:
cqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
CpipJ_CPIJ000183
Messenger RNA biogenesis [BR:
cqu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CpipJ_CPIJ000183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
TniB
nSTAND3
AAA_16
ATP_bind_1
ATPase_2
ATPase
AAA_14
AAA_22
CbiA
AAA_35
TsaE
AAA_18
AAA_24
Motif
Other DBs
NCBI-ProteinID:
EDS35156
UniProt:
B0VZR4
LinkDB
All DBs
AA seq
423 aa
AA seq
DB search
MGEEREATRTEYKLEMDSELRFEIENKNEKVTVTLMNGHAELFGTELVMRKPYEFGVGAK
VAIFTYHGCTIELRGKPDVAYVARETPMVQYLNSNSALEHLRAKAEQDDTQGPVVMIVGP
MDVGKTTLCRIFLNYAVRLGRRPIYVDLDVGQGGIAIPGTIGALLVERPAPVAEGFSQQA
PLVYHFGHTSPSDNDVFYGVLISKLAETTLERLEANKKAKYSGMIINTCGWVKGGGYRHI
LHAIKAFEVNAVFVLDQERLYNELLRDVERAVQIVFLPKSGGVVERTKSQRAEARDNRVR
EYFYGSKMPLYPHSFDVKFSDVKIFKVGSPALPDSCLPLGMKREDNYTKLVAVQPGPQLL
HHILAVSFAESTDDNVIQSNVAGFICVTNVSMEKEVLTILSPQPRPLPQTILLVSDFQFM
DSH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagaacgtgaagctacccggacggagtacaagctggagatggactccgagctg
cggttcgaaattgagaacaaaaatgagaaggtcaccgttacgctgatgaacggccacgcc
gagctgttcggaacggagctggtgatgcgcaagccgtacgagttcggggtcggtgccaag
gtggccatattcacctaccacggttgcacgatcgagctgcgcggcaagccggacgtggcg
tacgtagcccgcgagacgccgatggtccaatacctgaactcaaactccgcgctggagcat
ttgcgggccaaggccgaacaggacgacacccagggaccggtggtgatgatcgtgggaccg
atggacgtgggcaaaacgacgctgtgtcggatcttcctgaactacgccgttcggttggga
cgtagaccgatctacgtggatttggacgttggccagggaggcatcgccataccggggacg
atcggagcgttgctggtcgaacgacctgcgccggtagccgaaggattctcccagcaggct
ccactggtgtatcactttggacatacttccccatcggacaacgacgtgttttacggagtt
ctgatttcgaaactcgccgagaccacgctcgagcggttggaagccaacaaaaaggccaaa
tactcaggcatgatcatcaatacgtgcggctgggtcaagggaggaggttaccgccacatt
ctgcacgccatcaaagccttcgaagttaacgccgtgttcgtgctggaccaggaacgactc
tacaacgagctgctccgggacgtggaacgagccgtacagattgtgttcctgcccaaaagt
ggtggcgtcgtcgaacgcaccaagtcgcaacgagccgaagcgcgggacaatcgcgtccgc
gagtacttttacgggtccaaaatgccgctctacccacattccttcgacgtcaagtttagc
gacgtcaaaatcttcaaggtcggttcgccagcgctgcccgattcgtgtctgccgctgggc
atgaagcgggaagataactacacgaagctggtggccgttcagccgggaccgcagctgctg
caccacattctggcggtgagctttgccgaaagtacagacgataacgtaattcagagcaac
gtggccgggtttatctgcgtgacgaacgtcagcatggagaaggaagtgctgacgattttg
tcgccacagccgcggccgctgccgcaaactattctgctggtgtctgatttccaatttatg
gatagtcattag
DBGET
integrated database retrieval system
