KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ018254
Entry
CpipJ_CPIJ018254  CDS       T01079                                 
Name
(GenBank) cleavage stimulation factor 50 kDa subunit
  KO
K14406  cleavage stimulation factor subunit 1
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    CpipJ_CPIJ018254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqu03019]
    CpipJ_CPIJ018254
Messenger RNA biogenesis [BR:cqu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     CpipJ_CPIJ018254
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st CSTF1_dimer WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML EIF3I NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_SCAP WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Ge1_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_IFT140_2nd Beta-prop_Vps41 Beta-prop_HPS5 WD40_like Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_WDR41 DUF7165 WDR54 VPS8_N DUF7099 Tricorn_2nd Beta-prop_LRRK2
Other DBs
NCBI-ProteinID: EDS27300
UniProt: B0XG82
LinkDB
AA seq 334 aa
MMKDSDFVDPKNVVKCRELLYRLMISQLFYDGHHQLAVELTGLVRADPPCPPSDRLLNIF
RQASQIDSNKPTNVFDEITSGLDLEFEIESSALAPEPASYETAYVTSHKAACRAGCFSYD
GQLVATGSVDASIKILDVDRMLAKSAPDEQEPGREQQGHPVIRTLYDHTDEVAYLEFHPK
DQILASGSRDHTVKLFDISKASVKKAHKVLSDCVPVRSLAFHPTGDYMAVGTDHHVLRVY
DVHTGQCFVSAIPSQQHTDSITCVRYSVNAKVYATGSMDGAIKLWDGVSGRCINTFSQAH
DGSEICSIAFTRNGKYLLSSGQDSLVKLWEFKNF
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgatgaaagattcggactttgtggacccgaagaatgtggtcaagtgccgggagttgctg
taccgcttgatgatcagccaactcttctacgacggccatcaccagttggcggtcgagctg
acgggtttggtgcgtgccgatccgccgtgtccacccagcgatcggctgctgaacattttt
cgccaggcgagtcagatcgactcgaacaagccaacgaacgtctttgacgagatcacttcc
ggcttggatctggagtttgagatcgaaagctcggcgctggcaccggaaccggcgtcgtac
gagacggcgtacgttacgtcgcacaaggcggcctgccgggcgggttgcttcagctacgat
ggtcagctggttgccaccgggagtgtggacgccagtatcaagattctggacgtggaccgg
atgctggcaaagtcggcaccggacgagcaggagccggggcgcgagcagcagggtcacccg
gtcattcgaacgctgtatgatcacacggacgaggttgcctacctggagtttcacccgaag
gaccagatcttggcgtccggatcgcgcgaccacaccgtaaagctgtttgacatttccaag
gcatccgtcaagaaggcccacaaggtgctcagcgattgtgtccccgttcgcagccttgcg
ttccacccgaccggtgactacatggccgtcggaaccgatcaccacgtgctgcgcgtgtac
gacgtccacaccggccagtgtttcgtcagtgccattccctcccagcagcacaccgactcg
atcacctgcgtgcgatattccgtaaacgccaaagtctacgccaccggcagcatggacggc
gccatcaagctctgggacggcgtcagcggccgctgcatcaacaccttctcccaagcccac
gacggatcggagatctgctccatcgcgttcacccgcaacggaaagtacctgctctcctcc
ggacaagactcgctcgtcaaactctgggaatttaagaatttctga

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