Capsella rubella (pink shepherd's-purse): 17880053
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Entry
17880053 CDS
T02984
Name
(RefSeq) polyubiquitin
KO
K08770
ubiquitin C
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
17880053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17880053
Ubiquitin system [BR:
crb04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
17880053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Dsc3_N
Rad60-SLD_2
TBK1_ULD
DUF2604
Ubiquitin_5
TmoB
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
17880053
NCBI-ProteinID:
XP_006285847
UniProt:
R0H252
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MMQIHAKTLTEKTITLDVKSSDTINHVKAQIQDREGIPLDQQRLIFSGKLLDDGLTLADY
NIQKESVLHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGITPDQQRL
IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIILEVESSDTIDNVK
AKIQDKVGILPDQQRLIHAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK
TIILEVESSDTIDNVKAKIQDKEGILLDQQRLIYAGKQLEDGRTLADYNIQKESTLHLVL
RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGITPDQQRLIFAGKQLEDGRT
LADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD
QQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTI
DNVKAKIQDKEGILPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKT
LTGKTITLEVESSDTIDNVKAKIQDKEGITPDQQRLIFAGKQLEDGRTLADYNIQKESTL
HLVLRLRGGSF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaatccacgcaaagactcttacggagaaaaccataacccttgacgttaaaagc
tccgacaccatcaaccatgtcaaggcacagattcaagacagagaagggattcctctagac
cagcaaagacttatcttttctggtaagctgctagacgatggccttacgttggctgattac
aatattcagaaagagtctgttctccacttggctcttaggttgagaggaggtatgcagatc
tttgttaagactcttaccgggaagaccataactcttgaggttgaaagctctgacacgatt
gacaatgtcaaggctaagatccaagataaggaaggtattactccggaccagcagaggctt
atctttgcaggcaagcaacttgaagatggtcgtacattggctgactacaatattcaaaag
gagtcaactctacacttggttcttaggttgagaggtggcatgcaaatatttgtgaaaact
ctcaccggcaaaaccattattctagaagttgagagctctgacaccattgacaatgtcaag
gccaagatccaagacaaggtaggaatcctaccggaccagcaaagacttatccatgcgggc
aagcaactcgaggatggtcgaacccttgctgattacaatattcagaaggagtcaacactt
cacttggttcttaggttgagaggtggcatgcaaatctttgttaagactctaactggcaag
accataattcttgaagttgaaagctccgacaccattgataatgtcaaggccaagatccaa
gacaaggaaggaatcctactggaccagcagagacttatctatgcggggaagcaacttgag
gatggccgtactttggcggattacaatattcagaaggagtcaactctacacttggttctt
aggttgagaggaggcatgcaaatctttgttaagacccttacgggcaagaccataactctt
gaggtcgaaagttctgacacgattgacaatgtgaaggcgaagatccaagataaggaaggc
atcactccggaccagcagagacttatttttgcaggtaaacaactcgaggacggtcgtact
ttggctgattacaacatccagaaggagtcaacccttcatcttgtccttcgtcttcgtggt
ggcatgcaaatatttgtgaaaactctcaccggcaaaaccattactctagaagttgagagc
tctgacaccattgacaatgtcaaagccaagatccaagacaaggaagggatccctccggac
caacaacgacttatctttgcgggcaagcaactcgaggatggtcggacacttgcggattac
aacatccagaaggagtcaactctgcatttggttcttcgtcttcgtggtggcatgcaaata
ttcgtcaagacccttaccggaaaaaccataacactggaggttgaaagctcagacacaata
gacaatgtcaaggccaagatccaagacaaggaagggatcctaccagaccagcagagactt
atcttcgctggcaagcaactcgaggatggccgaaccctagcggattacaacatccagaag
gagtcaacacttcacctagtgctgcgtcttcgtggtgggatgcagatttttgtcaagact
ttgacgggcaaaaccatcactctagaggtcgagagctctgatacgattgataacgtgaag
gccaagattcaagacaaagaagggatcacaccggaccagcagagactaatctttgccggt
aaacaactcgaagatggtcgaacacttgcagattacaatatccagaaagagtctactctt
caccttgttcttcgtctccgcggtggaagcttttga
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