Capsella rubella (pink shepherd's-purse): 17880467
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Entry
17880467 CDS
T02984
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17880467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17880467
03036 Chromosome and associated proteins [BR:
crb03036
]
17880467
Spliceosome [BR:
crb03041
]
Complex B
Other components
Prp19-related factors
17880467
Complex C
17880467
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
17880467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_14
HAT
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
HAT_Syf1_M
ARM_TT21
RNase_H2_suC
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
17880467
NCBI-ProteinID:
XP_006283231
UniProt:
R0GH63
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MASGGKDSDRTLGYMTRKDTEVKLPRPTRVKNKTPAPVQITAEQILREARERQEAEIRPP
KQKITDSTELSDYRLRRRKEFEDQIRRARWNIQVWVKYAQWEESQKDYARARSVWERAIE
GDYRNHTLWLKYAEFEMKNKFVNSARNVWDRAVTLLPRIDQLWYKYIHMEEILGNIAGAR
QIFERWMDWSPDQQGWLSFIKFELRYNEIERARTIYERFVLCHPRVSAYIRYAKFEMKGG
EVARCRSVYERATEKLADDEEAEQLFVAFAEFEERCKEVERARFIYKFALDHIPKGRAED
LYRKFVAFEKQYGDKEGIEDAIVGKRRFQYEEEVRKNPLNYDSWFDYVRLEESVGNKDRI
REIYERAIANVPPAEEKRYWQRYIYLWINYALYEEIETEDVERTRDVYRECLKLIPHSKF
SFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYE
RYLEWSPENCYAWSKYAELERSLAETERARAIFELAISQPALDMPELLWKAYIDFEISEG
ELEMTRALYERLLDRTKHYKVWVSFAKFEASAAELKEDENEDEDQEEGVLEHKKECIRRA
RAIFDRANTYYKDSAPELKEERATLLEDWLNTETSFGNLGDVSIVRSKLPKKLKKRKQIT
REDGSTEYEEYIDYMYPEESQTTNLKILEAAYKWKKQKVAASEED
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggcggaaaagattccgaccgtaccttagggtacatgacccgcaaagatact
gaagtgaagcttccaagacctactcgtgtcaagaacaaaactccggcgccggttcaaatc
accgccgagcaaattttgagagaagctcgtgagagacaagaagctgagatccgtccgcct
aagcagaaaatcactgattccactgagctttccgactacagactccgccggagaaaggaa
tttgaggaccagatccgtcgcgccagatggaacattcaggtttgggtcaagtacgctcaa
tgggaagagtcgcagaaggattacgctcgtgctcggagtgtatgggaacgagccatagaa
ggagattacaggaaccatacgctttggctcaagtacgctgagttcgagatgaagaacaag
tttgtcaacagtgcgagaaacgtttgggatcgagctgttacgcttcttcctcgtattgac
cagctttggtacaagtatattcatatggaggagatacttgggaacattgccggagctaga
cagatttttgaacggtggatggattggtctccggatcaacaaggttggctctcctttatt
aaattcgaacttaggtataatgaaatcgaacgtgctagaacgatttacgagagatttgtt
ctttgtcatccgagagtatctgcttatattagatatgctaagtttgagatgaagggtggt
gaagtggcgcgttgtaggagtgtgtatgaacgtgccacagagaagctagctgatgatgaa
gaagctgagcagctctttgtggcatttgctgagtttgaagaacgctgtaaggaagtagaa
agagctaggtttatctataagtttgctcttgatcatattcctaaaggcagagctgaggat
ttgtatagaaagtttgtggcttttgagaaacagtatggtgataaggaaggaattgaggat
gccattgttgggaagaggaggtttcagtatgaagaggaagtgaggaagaatcctttgaac
tatgattcatggtttgattatgttaggctagaggagagtgtgggaaacaaagataggatc
agagaaatctatgagagggctattgctaatgttccacctgctgaggagaaacgatattgg
caaagatatatctatctttggattaattatgcattgtatgaagaaattgaaactgaagat
gttgagcgtactcgagatgtttacagagaatgtctcaaacttatcccccacagcaaattt
tcttttgccaaaatatggttgctcgctgcacagtttgagatcaggcaattgaatctcaca
ggtgcacgacagatattgggaaatgcaattggaaaagctccaaaagataagatatttaag
aagtacattgagatcgagcttcagttgggaaacatagataggtgtagaaagttatatgaa
cggtatcttgagtggtctcctgagaattgctatgcttggagcaagtatgctgaattagaa
aggtctcttgctgaaaccgaacgagctagagctatatttgaacttgcaatatcccagcca
gctcttgacatgcctgagctgctatggaaggcatacattgattttgagatatcagaaggg
gaattagagatgacccgagctttgtatgaacgactcttagaccgtactaagcactacaag
gtgtgggttagctttgcaaagtttgaagcttcagctgcagaactaaaagaagatgagaac
gaagatgaagaccaagaagaaggtgttcttgaacacaaaaaggaatgtatcagacgtgct
agagcgattttcgatagagccaacacatattacaaagactctgcaccagagctgaaggaa
gaacgagctacactcttggaggattggctgaacacggagacgagctttggtaacctcggg
gatgttagtatcgtccggtcaaagcttccaaagaagctcaagaagagaaagcagatcacc
agagaagacggttcaacagagtacgaagaatacatcgattatatgtacccagaagaatcg
cagacaacgaatctcaagattctcgaagctgcatacaaatggaagaaacagaaggtcgct
gcttctgaggaagattaa
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