Capsella rubella (pink shepherd's-purse): 17881893
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Entry
17881893 CDS
T02984
Name
(RefSeq) testis-expressed protein 10
KO
K14827
pre-rRNA-processing protein IPI1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
17881893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17881893
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
17881893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TOR1L1_N
HEAT_MROH2B_C
HEAT_GCN1
RIX1
Motif
Other DBs
NCBI-GeneID:
17881893
NCBI-ProteinID:
XP_006287041
UniProt:
R0GSU4
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MVRSKAPAKKQQKKGIDFKKIKRKLGRKLPPPKNATNTEIKSKAIILPEQSVGAEKSGLA
TSKKGLTLKELLHQTSHHNAKVRKDALHGIKDLLKNYPAELQSHKYTIIQKLRERINDDD
MLVRDTFYQLFESEIFPACKEDSQGPMVSLLMSYVFNGMTNSAIDVRLMAFKFFHLVVEY
YPPTFSLYAEKILENYKDIIQKNHFYVQDKNKLKVALSGLAHCLSLLPCDESNIESQKQG
PLRNEPILAYEQDGAKVSSHFSHVSGGLKEIVGVLINCFQDFIPLIHAPRGFDAPSFNCI
NHILCSIRYAIKFSIHRHTQRQNTWLPASEEVTLMILDQDIASLLSKKLLGSFPLNPENN
LSGKVDERYFILNSRLTEIFLEVSEWSHLPTDISNRFLEFIENTLLGKIIGSIRLSKPIH
EKTLLAFLPFVPKLILRVDHDWRENLLQAFTATFSDCKPESTLKLACVSIVRDVIIPNGD
IRYPNASVPTVNNYQSAWVNKLPSLLNLLGDKHPESTKVVLQLLLDLGRVGCLNHCPTFE
EDIRNFFIPSQGEGDVHGGSFANLPRETQELALCFLYYFTIDNFSSPMLKAIVSCCLYPQ
LEPGVLYRIVEILHTAYRAGYIHITDHFSFLITVIARFKAVPEKLQVVMECNERKTYCGT
FQALTNLVCSCLSEMGDGSLVLQILEKVLLEQIIVKPALENGCAILRMICALDSKPTKLS
QSSLTTLIEFLPGYLIDIVNCIPEDKENSYLYIQTCLYYLLPCYFLFERSSKLTEQVLKR
MQSMVSENTKALESVQDRESGRNSLNLIQCIVSVILLMHNDVKVRKIILLSKSEIDLILQ
NVISLQSSRSTSLTVEGKHMMKIAGERLKIASKSLLA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggttcgctccaaggctcctgcaaagaagcagcaaaagaaaggaattgatttcaagaaa
attaagagaaagctcgggagaaaattgcctccaccgaagaatgcaactaacactgagatt
aaatccaaagctattatacttcctgaacaaagtgtgggagctgaaaagagtggcttagct
acaagtaagaaaggtttgaccttgaaagagcttctgcatcaaacttctcatcacaatgcc
aaagttcgcaaggatgcattacacggtatcaaagaccttttaaagaattatccggcagag
ctgcagtcacataaatatactatcatacagaaactcagggaacgcattaatgatgatgat
atgctagtgagagatactttttatcaactatttgagagtgagatctttcctgcttgtaag
gaggatagccagggccctatggtgtcacttttaatgtcatacgtatttaacggtatgact
aattcagcgattgatgttcggttgatggcttttaaatttttccaccttgttgtggagtac
tacccgcctaccttttccttgtatgctgaaaagattctcgaaaactacaaggatattatt
caaaaaaaccatttttatgtccaagataaaaacaagctaaaggtagctctttctgggttg
gcacattgcctgtcgctgttgccatgtgatgagagtaacatcgaatcacaaaagcaggga
cctttacggaatgaaccgatactcgcgtatgagcaagatggtgcaaaagtatcttctcat
ttttcccatgtctccgggggattgaaggagattgttggagtcttaatcaattgtttccaa
gatttcattccattgattcatgctccgcgaggattcgatgcaccatcatttaactgtatc
aaccatatactttgcagcatacgttatgcaatcaagttttccattcataggcacactcag
agacagaatacatggctacccgcatctgaagaagttactctgatgatactggatcaagac
atagcgtcattgttatcgaaaaagttacttggttcttttccccttaatccagaaaacaat
ctttctgggaaggttgatgaaaggtactttatcctcaatagtagattgacagaaatcttt
ttggaagtaagtgaatggagccaccttcctactgatatttccaatagatttctggaattt
attgagaatacactactaggcaagatcatcgggagcattaggcttagtaaacctattcac
gagaagacattacttgcattcttgccctttgttccaaaacttattttgagggtggaccat
gactggagagaaaatcttctgcaggcatttaccgctaccttcagcgactgcaaaccagag
tctacacttaaattagcctgcgtttcaattgttagagacgtgattatccctaatggagat
atccgttatcccaatgcaagtgtaccaacagtaaataactaccagagtgcttgggtcaac
aaacttccatcactgcttaatctgttaggtgataagcatcccgaatctaccaaggttgtt
ttgcaacttttgcttgaccttgggcgagttgggtgtctgaatcattgccccacatttgaa
gaagacatcagaaacttcttcatcccttctcagggagaaggtgatgtacatgggggatct
tttgcaaatctccctagggaaacccaagaactggctctctgttttctttattacttcacc
atagacaatttcagctcccctatgctgaaagcaatagtttcatgctgtctgtatccacaa
cttgaaccaggtgtgttgtatcgaatagtggaaattcttcacactgcttacagagctgga
tatatccatattacagatcattttagcttccttatcactgtaattgcacgtttcaaagct
gtcccagagaaattgcaggtagtgatggagtgtaatgagcggaagacatattgtggcacg
tttcaagcgcttacaaaccttgtgtgttcatgcttgtcagaaatgggtgatggttctctt
gttctccagattctagagaaagttttactcgaacaaataattgtgaagcctgcgttggaa
aatggctgtgccatactcaggatgatctgcgcgttggactctaaacctacgaaactttct
caaagcagtttaacaactctaattgaattcttaccaggatacttgatcgacatagtcaat
tgtataccagaagataaggagaactcttacctttacatacaaacatgtctctactattta
ttaccttgctatttcttgttcgagcgaagctccaaactcacggaacaggttctgaaaaga
atgcaatcgatggttagtgaaaacaccaaagcactggaatcggtccaagacagggagagt
ggtcgaaactcgttgaatttgatacagtgtatagtctctgtgatcctgctgatgcacaac
gatgtcaaagttaggaagataatattgttatccaagtcggagatcgatttgattctgcag
aacgttatctctttgcagtcctcacgaagtacaagcttgactgttgaaggaaaacatatg
atgaaaattgcgggggagcgacttaaaattgcatccaaaagcttactcgcctaa
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