Capsella rubella (pink shepherd's-purse): 17882401
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Entry
17882401 CDS
T02984
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00531
Glycosaminoglycan degradation
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
17882401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
crb00536
]
17882401
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
17882401
Glycosaminoglycan binding proteins [BR:
crb00536
]
Heparan sulfate / Heparin
Enzymes
17882401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
Leu_Phe_trans
Motif
Other DBs
NCBI-GeneID:
17882401
NCBI-ProteinID:
XP_006289223
UniProt:
R0FJ70
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MVKLKNNTMAFRVCLFFILSCLLLVPETTMAQEMKRVSIVVEGARRVSETDENFVCATLD
WWPHDKCNYEQCPWGYSSVINMDLTRPLLSKAIKAFKPLRIRIGGSLQDQVTYDVGNLKT
PCRPFGKMNSGLFGFSKGCLHMKRWDELNSFLTATGAVVTFGLNALRGRHKLRGKAWGGA
WDHVNTQDFINYTVSKGYAIDSWEFGNELAGSGVGASVSAELYGKDMIVLKDVINKVYKD
SRLTKPKLVAPGGFYEKQWYTKLLQISGPGVIDVVTHHMYNLGSGNDPALVKKIMDPSFL
SKVSETFKDVNQTIQEHGPWASPWVGESGGAYNSGGRHVSDTFIDSFWYLDQLGMSSRLN
TKVYCRQTLVGGFYGLLEKGTFVPNPDYYSALLWHRLMGKGVLAVHTDGPPQLRVYAHCS
KGRAGVTLLLINLSNQSDFTVSVSNGINVVLNAEPKKKKSLLDTLKKPFSWIGSKASDGY
LNREEYHLTPENRELRSKTMMLNGKPLKPTATGDIPSLEPVIRGVNSPINVLPLSMAFIV
LPNFDASACS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctaaaaaacaatacaatggccttcagagtttgtttatttttcatcttgagt
tgtcttcttctagttccagagacaaccatggctcaagaaatgaagcgtgtatcgatcgtt
gttgaaggagctcgtcgagtctctgagaccgacgagaactttgtctgtgcgacattggac
tggtggccacatgacaagtgcaactatgaacaatgtccttggggatactcttcagttatc
aacatggacttaactcgaccccttctttctaaagctattaaagctttcaagccgttgagg
ataagaattggcggttcactgcaagatcaagttacttacgacgtaggaaatctcaaaact
ccttgccgtccattcgggaaaatgaacagcggtttgtttgggttctctaaaggatgcttg
catatgaagcgatgggacgagctcaacagtttcctaactgcaaccggagctgtagtgact
tttggtttaaacgctttgcgtgggaggcacaaactgcgcggaaaggcgtggggtggggcg
tgggatcacgttaacactcaagatttcataaactacacagtctcaaagggttacgctatt
gattcttgggaattcggaaacgagctcgcgggaagtggggttggtgcgagtgtgagcgca
gaactttacgggaaagacatgattgtacttaaagatgtaatcaacaaagtttacaaagat
tcccggttaaccaagcctaaacttgtggctcctggaggattctatgaaaaacaatggtac
accaaacttcttcaaatctctggtcccggtgttattgacgttgtgactcatcatatgtac
aatcttggttcaggaaatgatcctgcgctggtgaagaagataatggatccgagtttctta
agtaaggtatctgaaacattcaaggacgtgaaccagacaattcaagaacatggaccgtgg
gcttctccttgggttggagaatctggtggagcttacaatagtggtggccgtcatgtttca
gatacattcatagatagcttctggtatctagatcagcttggaatgtcgtcaagactcaac
actaaagtttactgcagacagactctggttggagggttttacggcttgctcgaaaaagga
acgtttgttccaaatccggattactatagtgcactgctttggcatcgtttaatgggcaaa
ggggtccttgcggttcatacagatggaccaccgcagctacgggtttatgcacattgttca
aaaggaagagcgggtgtcacattgcttctgataaatctaagcaatcaatcagattttaca
gttagtgtcagcaatggcataaatgtggttttgaacgcggaaccaaagaagaagaagtca
ttgttagatactttgaaaaaaccattttcttggattggaagcaaagcttctgatgggtat
ttaaacagagaagagtatcatctgacaccagaaaaccgtgagttgcggagtaaaacaatg
atgttgaatggtaaaccgttaaaaccgacagcaacaggagatatcccgagccttgaaccg
gtcatccgtggtgtgaactctccgattaacgtcttgccgttgtcgatggcgttcattgtg
ttgcctaattttgatgcttctgcttgttcatga
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