Capsella rubella (pink shepherd's-purse): 17885392
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Entry
17885392 CDS
T02984
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17885392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17885392
03036 Chromosome and associated proteins [BR:
crb03036
]
17885392
Spliceosome [BR:
crb03041
]
Complex B
Other components
Prp19-related factors
17885392
Complex C
17885392
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
17885392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
HAT
TPR_19
U3_assoc_6
EcoEI_R_C
TPR_9
ARM_TT21
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
17885392
NCBI-ProteinID:
XP_006290701
UniProt:
R0H2X0
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MATSMQVKNKTPAPVQITSEQIFRETRDRQDDQTQPPPKHNINDSSEVSDYRLRRRKEFE
DQIRGARTKNQIFVRYADWEESQKDYARARSVWERALADGNKNHTLWLKYGEFEMRNKFV
NSARNVWDRAVMLLPRVDQLWYKFSDMEERLGNIAGARQVFQRWMEWSPDQQAWLSFIKF
ELRYNEVEHARSIFERFVLCHPKASAFIRFAKFEMKNSEVAVARSVYERAREMLKDVEEE
AEFIFVAYAEFEERCKEVERARVIYKFALEHIPKGRGGDLYKKFVAFEKQYGDKEGIEAA
IVSQRRFQYEDEVRTNPLNYDSWFDYIRLEETLKNKDRIREIYERAIANVPPAQEKRYWQ
RYIYLWIEYAMYEEIEAEDVERTRAVYRKCLKLIPHAKFSFAKIWLLAAQFEIRQLDLTG
ARKILGNAIGKAPKHKLFRKYIEIELHLGNIDRCRKLYHQYLEWCPENCYAWREFAELER
SLAETERARAIFELAISQPALDMPELLWKAYIDFEISIGELERTRTLYERLLERTKHYKV
WLSFAKFEASAAEDNVILEHSRVILDKANTYYKESKPELKEERATLLEDWLDMEKSFGML
VDISVVQSKLPKKLKKRKAITREDGSTEYEEYMDYVFPEESETTNLKILEAAYKWKKQKV
AAV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgatgcaagtgaagaacaagacaccagcaccggtgcaaatcacatcggaa
caaattttcagagaaacgcgtgataggcaagatgatcagacccaaccaccgcctaagcac
aatatcaacgattcgtctgaggtttccgactacagactccgacgtcggaaggagtttgag
gaccagatccgcggagcccgaacgaaaaatcaaatttttgtgaggtatgcggactgggaa
gagtcgcaaaaggattacgcgcgtgctcgtagcgtgtgggaacgagctttggcagacggt
aacaagaatcatacgctctggctcaaatacggagagtttgagatgaggaacaaattcgta
aacagtgccaggaacgtgtgggatcgagccgtgatgcttctccctcgcgtggaccagctc
tggtacaagtttagtgacatggaggagagacttgggaatatcgccggagctagacaggtc
ttccaacggtggatggaatggtcacctgatcaacaagcttggctctctttcattaaattc
gaacttagatataacgaagtcgagcacgctagatccatcttcgagagatttgtgctttgc
catccaaaagcttctgcttttattcgatttgcaaagtttgagatgaagaacagtgaagtt
gcggtcgcgaggagtgtgtacgagcgagccagggagatgctgaaagacgtagaagaagaa
gctgagtttatctttgtggcctatgctgagtttgaagaacggtgcaaagaagtggagcgg
gctagggttatctacaagtttgctcttgaacatatccctaaaggaagaggtggggatttg
tataagaagtttgtggcgtttgagaaacaatatggggataaagaaggtattgaggctgcc
attgttagccagagaaggtttcagtatgaagatgaagtgaggacgaaccctttgaactat
gattcctggttcgattacattagattagaggagactctaaagaacaaggacaggatcaga
gaaatctatgagagggctattgctaatgttccacctgctcaggagaaacgatactggcag
agatatatctatctgtggattgaatatgcaatgtatgaagagattgaagctgaagatgtg
gagcgtacaagagctgtatacagaaaatgcctcaagcttatcccgcacgcaaaattctct
tttgccaaaatatggttgcttgctgcacagtttgagatcaggcaactggatctcactggt
gctcggaagatattagggaacgccattggcaaagctccaaagcataagttattcaggaaa
tacattgagatcgaactccacctgggaaacatagatagatgtcgaaaactgtaccatcag
tatcttgaatggtgtcctgagaattgctatgcttggagagagtttgctgagttggagagg
tctcttgctgagacagaacgagctagagctatttttgaacttgcaatatcccagcctgct
cttgacatgcccgagttgctatggaaggcatacattgattttgagatatcaattggggaa
ttagagagaacaagaactttatatgagcgactcttggagcgtacaaagcattacaaggtg
tggcttagtttcgcaaagtttgaagcttctgctgctgaagacaatgttattcttgaacac
tcgagagtgattctcgataaagccaacacatactacaaagagtctaaaccggagctgaag
gaagaaagggctactctgttggaggattggctggacatggagaagagttttggtatgctt
gtggatatcagtgttgttcagtcgaagctcccgaagaagctcaagaagagaaaggcaatc
acaagagaagacggttcaacagagtatgaagaatacatggattatgtgttcccagaagaa
tcggagacgacaaatctcaagattcttgaagctgcttataaatggaagaagcagaaagtt
gctgctgtctga
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integrated database retrieval system
