Capsella rubella (pink shepherd's-purse): 17891075
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Entry
17891075 CDS
T02984
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03020
RNA polymerase
crb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
17891075
09124 Replication and repair
03420 Nucleotide excision repair
17891075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17891075
03400 DNA repair and recombination proteins [BR:
crb03400
]
17891075
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
17891075
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
17891075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
17891075
NCBI-ProteinID:
XP_006298158
UniProt:
R0G6M0
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MDGATYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDV
TSRDLYSADPTVTPVDFTIDSSASDSSEHKGIIIVKLRRGQELRLRAIARKGIGKDHAKW
SPAATVTFMYEPDIIINEDMMDTLTEDEKIDLIESCPTKVFGIDPVTRQVVVVDPEAYTY
DEEVIKKAEAMGKPGLIEIHPKDDSFIFTVESTGAVKASQLVLNAIDILKQKLDAVRLSD
DTVEADDQFGELGAHMHGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgcgacttaccaaagattcccaaaggtgaagatccgcgagcttaaagacgac
tacgccaagttcgagctccgtgaaaccgatgtttccatggcgaacgctctccgtcgcgtt
atgatctccgaagtcccaaccgttgcaatcgatctagtcgaaatcgaggttaactcctct
gtgctcaacgacgagttcattgctcatcgattaggtctcattcctctgacaagcgagcgt
gcgatgagcatgaggttctctagagattgtgatgcttgtgatggagatggacagtgcgag
ttttgctctgttgagtttaggcttagctctaagtgtgttactgatcaaaccctagatgtg
actagtagggatctctacagtgctgatcctactgtgactcctgtggatttcactattgac
tcgtctgcgtctgattcaagcgagcataaggggattatcattgtgaaactgcgcagggga
caagaactgaggcttagggcgatagcgaggaaaggaattgggaaagatcatgcgaaatgg
tctccagcagctactgttacgtttatgtatgagcctgacattattatcaatgaagacatg
atggacacattgacagaggatgaaaaaatcgatttgattgagagctgtccaaccaaggtt
tttggcattgacccagtcaccagacaggttgtggtggttgatcctgaagcttacacgtac
gatgaagaagtgatcaagaaagctgaagcgatggggaaaccgggactcattgagatccat
ccaaaagacgatagttttatattcactgttgaatccacaggtgcagtgaaggcatcacag
ctggtactaaatgccatagatatcctgaagcagaagcttgatgcagtccgtctctcagat
gacactgtcgaagcagatgatcagtttggtgaactcggcgcccatatgcatggaggatga
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integrated database retrieval system
