Capsella rubella (pink shepherd's-purse): 17893461
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Entry
17893461 CDS
T02984
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g16880
Organism
crb
Capsella rubella (pink shepherd's-purse)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_3
TPR_24
PPR_long
MRP-S27
TPR_IF140_C
TPR_25
Mtf2
RPN7
Motif
Other DBs
NCBI-GeneID:
17893461
NCBI-ProteinID:
XP_006300031
UniProt:
R0HT02
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MATLKPPESQLLKTLTSILTSEKTHLLETLNPYIPQITQPLLTSLLSSPSLAKKPETLVS
FYQWAQTSIPEAFPSNSPLPLLTVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSLLH
PNLHLSPHPSKALFDIALSSYLHAGKPHVALQIFQKMIRLKLKPNLLTCNTLLLGLVRYP
STFSLSSAREVFDDMVKLGVSLNVQTFNVLVNGYCLEGKLDDAVGMLERMVSEFSVNPDN
VTYNTILKAMSTKGRLNDVKTLLLDMKKFGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL
MKQTNILPDLWTYNMLINGLCNAGSVREALELMDEMKHLKLQPDVVTYNTLIDGCFEFGI
SLEARKLMEQMENDGVKPNQVTHNISVKWLCKEENREEVTRKVKELVEVHGFSPDRVTYH
TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKPDEAYNLLNNAHKR
GYIIDEVSYGTLITGYFREEKVEKALEMWDEMKKIKITPTVSTFNSLIGGLCHHGKTELA
MEKFDELAGNGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG
LCKEGMTEKALNFFNTLIKEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR
FTYNSIITSLMKDGKLSEADELLEKISVKFGSMKQNLQAETENKPATSESKEEHNTEPII
AYSDVINELCNRGRLKGHSKSYTG
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttgaagccaccggaatctcaattactaaaaaccctaacatcaatcctcact
tcagagaagacccatttgctcgaaaccctaaatccctacatccctcaaatcacacagcct
ctccttacctctctcctctcttctccttcactcgctaagaaacccgaaaccctagtctcc
ttctaccaatgggcacagacttcaatcccagaagcattcccatcgaattcccctcttccc
cttctcaccgtagtccgttctcttctctcccaccacaaattcgctgacgccaagtctctt
ctcgtctcctacatccgcacctctgatgcatctctctctctttgcaactctctcctccac
ccgaatcttcatctctcgcctcatccctctaaggctctgttcgacattgctctcagttcg
tatcttcatgccggaaagcctcacgttgcgttacagatctttcagaagatgattcgatta
aagctcaaaccaaatctgctcacttgcaacactcttctccttggtttagttaggtaccct
tctactttctctctctcgagtgctagagaagtgtttgatgatatggttaagcttggtgtc
tcgctaaatgtgcaaactttcaatgttttggttaatgggtattgtttagaaggaaagctt
gatgatgctgtaggaatgttagagaggatggttagtgagttcagtgtgaatcctgataat
gttacttacaatacgattctgaaagcaatgtctacgaaagggcgtttgaatgatgttaag
acattgttgttggatatgaagaagtttgggttggtgccaaatagggttacttacaataat
ttagtgtatggttactgtaagctgggttcgttgaaagaagcatttcagattgtggagctg
atgaagcaaacaaacatattaccggatctttggacctataacatgttgatcaatgggctg
tgcaatgcgggaagtgtcagggaagctcttgaattaatggatgagatgaagcatttgaag
ttacagccagatgtggttacttacaatacattgattgatgggtgtttcgaatttgggatt
agtttggaggctaggaagttaatggagcaaatggaaaatgatggagttaaacctaaccaa
gtgactcataatatctctgttaagtggctttgtaaggaagagaatagggaagaggttact
agaaaggttaaggaattggtggaagtgcacgggttttctcctgacagagtaacttatcat
accctaattaaagcatatttgaaagtaggagatttgagtggtgcccttgaaatgatgcgt
gagatggggcaaaaaggcattaagatgaatactattacccttaataccattcttgatgct
ctatgtaaagagaggaaacctgatgaagcatacaatttgctgaataatgcacacaaacga
ggatatattattgacgaggttagttatggcacattaatcacaggatacttcagggaagaa
aaagtggagaaagctttggagatgtgggacgagatgaagaagataaagattactcctacc
gtgagcacctttaactctttaattggaggtctctgtcaccatggaaaaactgagctagca
atggagaaattcgatgagcttgccgggaatggtttgcttccagatgatagtactttcaat
tcaatcatcctaggatactgcaaagaaggacgagttgagaaagcattcgagttttacaac
gaatcgatcaaacactctttcaagcctgataactatacatgcaacattcttctcaatggt
ctttgtaaggaaggtatgacagaaaaggctctcaatttcttcaatacacttatcaaggag
agagaggttgatacagttacatacaacacgatgatctcggctttctgcaaagacaagaag
ttaaaagaagcatatgatcttctatcagaaatggaggagaaaggactagagcctgatcgg
ttcacgtacaacagtatcatcacttcacttatgaaagatggtaagctgagtgaagcagat
gaactgttggagaaaatttctgtaaagttcggctcgatgaaacagaatttgcaggcagaa
acagagaacaagccagccacaagtgaatcaaaggaggaacataacactgaacctattatt
gcttactcagatgtaataaacgaactatgtaatagaggaagattaaaggggcattctaaa
tcttacactggttga
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