KEGG   Capsella rubella (pink shepherd's-purse): 17898441
Entry
17898441          CDS       T02984                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    17898441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crb03041]
    17898441
Spliceosome [BR:crb03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    17898441
 Complex B
    17898441
 Complex C
   U2 SnRNP specific factors
    17898441
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 17898441
NCBI-ProteinID: XP_023632726
LinkDB
Position
Unknown
AA seq 786 aa
MLSSMEILPLEAPPTDGNLGPLPPSQLTDQEVEERELQAEQNNSNHAPAAVATHTRTIGI
IHPPPDIRTIVEKTAQFVSKNGLEFEKRIIASNEKNAKFNFLKSVDPYHAFYQHKLTEYR
AQNKDGAQGTDDSDGTDHPQLDAAATAADESEAGDAQPDLQAQFRIPPKPLEPPEPEKYT
VRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTTRENNNLQFQFIKPTHSMFTFFTSLV
DAYSEVLMPPKDLKEKLRKSAADLTTVLERCLHRLEWDRSQEQQKKKEEDEKEQERVQMA
MIDWHDFAVVESIDFADEEDEELPPPMTLDEVIRRSKVSAMEEDEIVEPGKEVEMEMDEE
EVKLVAEGMRAANLEENVKIENIHDEEAPMRIVKNWKRPEDRIPTERDPTKVVISPITGE
LIPINEMSEHMRISLIDPKFKEQKDRMFAKIRETTLAQDDEIAKNIVGLARLRPDIFGTT
EEEVSNAVKAEIEKKKDEQPKQVIWDGHTGSIGRTANQALTQNANGEEQGDGVYGDPNSF
PGPAALPPPRPGVPTVRPLPPPANLALNLPRPPPTVQYPGVLRPLGVPMMQPMHQQHQLS
MPGPPGHPSMMMNRPPQMQSGMPVPPPPGSQFPHMQVPRPYGQHPPPPMGMMQPPSMPGM
PPPPPPSEAPPPLPEEPEPKRQKFDESALVPEDQFLAQHPGSATIRISVPNAEDGPQVIE
ITVQSLSENVGSLKEKIAGETQTPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSMRE
RGGRKR
NT seq 2361 nt   +upstreamnt  +downstreamnt
atgttgagttcgatggagatattgccactggaggctcctcctaccgatgggaacttaggt
ccactgcctccttcgcagctaacagatcaggaagtcgaagagagggagttgcaagcagag
caaaacaactcaaatcatgctcctgcggctgttgccactcacactaggactatcggtatc
attcatccacctcctgatatcagaactattgtcgagaaaacggctcagtttgtttcgaaa
aacgggttggagtttgaaaagaggattatagccagtaacgaaaagaatgctaaattcaac
tttttgaagagcgtagatccttatcatgccttttaccagcataagctcactgaataccgt
gctcagaataaagacggagctcagggtactgatgattcagatggtacagatcatccccaa
cttgatgctgcagctactgctgccgatgagtctgaagcaggtgatgcacaacctgacctt
caggctcagtttaggattcctcctaagcctctagaacctccagagcctgagaagtataca
gttagacttcctgaagggatcacaggtgaggagcttgatattattaagctcactgcccag
ttcgtggcacggaatgggaagtcgtttttaacggggttgacgactagagagaacaacaat
cttcagtttcagtttattaagccaacgcatagcatgttcactttttttacttctctggtt
gatgcgtattccgaagtattaatgcctcccaaagatttgaaagaaaagttgagaaagagt
gctgctgatttgactaccgttcttgagcgttgtttgcatcgtcttgaatgggatcgttcc
caggagcagcagaagaagaaagaagaggatgagaaagagcaggagcgggtgcagatggct
atgattgattggcatgattttgcggttgttgagtctatagattttgcggatgaggaagat
gaagagttgccaccgcctatgacacttgacgaggtgataaggaggagcaaagtatctgcg
atggaagaagatgaaattgttgagcctggaaaggaggttgaaatggaaatggacgaagaa
gaagttaagcttgttgcagaaggaatgagagcagcaaacctagaagagaatgttaagatt
gaaaatatacatgacgaagaagcacctatgcgaattgttaagaactggaagaggccagaa
gacaggatcccgacggaaagagatccaactaaagttgttatatcaccaattactggcgaa
ttgattcccattaacgagatgtctgagcacatgcgaatttcccttattgatcctaaattt
aaagagcagaaggatcggatgtttgctaagattcgtgagaccacacttgcacaggatgat
gaaattgctaaaaacattgttgggttggcccgcctgcgtcctgatatctttggaacaacc
gaagaagaagtctcaaatgctgtaaaagcagagattgagaagaagaaagatgagcagcca
aagcaagtaatatgggatggtcacacaggaagtatcggtcgcacagcaaaccaagccttg
actcagaacgctaatggagaggagcaaggtgatggtgtttatggagatcccaatagcttc
cctggtccagctgctcttccgcctcctcgaccaggtgtcccaacagtccggccactgcca
ccacctgctaatctcgccttgaacctccctcgtcctcctcctactgttcagtaccctggt
gtactgaggccacttggtgttccaatgatgcagccaatgcatcagcaacaccagctctca
atgcctgggccacctggacacccttcaatgatgatgaaccgaccaccacaaatgcagtct
ggtatgcctgtgccgcctccaccaggatctcagtttcctcatatgcaagttcctagacct
tatggtcagcatccaccacctccaatggggatgatgcaaccaccatctatgcctgggatg
cctcctcccccaccaccctcggaggcaccaccacctcttccggaggagcctgagccaaag
agacaaaagttcgacgagtcagcccttgttccagaagaccagtttcttgctcagcatccg
ggttcggctacaatcaggatttctgtgccaaacgcggaagatgggccgcaagtcattgag
atcacagtgcagtcgttgtccgaaaatgtgggaagtttgaaggagaaaatagctggggag
acacaaactcctgcaaacaaacagaagttaagtggaaaagctgggttcttaaaggacaac
atgtcgcttgcacattacaatgttggagcaggagaaattctgacattgtctatgagggaa
cgtggtgggagaaagagatag

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