Chlamydomonas reinhardtii: CHLRE_07g335750v5
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Entry
CHLRE_07g335750v5 CDS
T01039
Name
(RefSeq) uncharacterized protein
KO
K16474
intraflagellar transport protein 88
Organism
cre
Chlamydomonas reinhardtii
Brite
KEGG Orthology (KO) [BR:
cre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cre03037
]
CHLRE_07g335750v5
Cilium and associated proteins [BR:
cre03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
CHLRE_07g335750v5
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_19
TPR_1
TPR_14
TPR_6
TPR_8
TPR_16
TPR_17
TPR_10
TPR_11
TPR_9
ANAPC3
TPR_CcmH_CycH
ARM_TT21_5th
TPR_21
TPR_15
TPR_Slam
Iml2-TPR_39
ARM_TT21_N
NTS_TR130
ARM_TT21_4th
TPR_3
Motif
Other DBs
NCBI-GeneID:
5725696
NCBI-ProteinID:
XP_001700100
UniProt:
A8JCJ2
Structure
PDB
PDBj
LinkDB
All DBs
Position
7:complement(3486976..3492847)
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AA seq
782 aa
AA seq
DB search
MSYGGTEEDDLYGGYDEQSNPLAGSGGAAFKALGADGAPPGTAMMGPPGTAMKSFVPGTA
MRGGTAMQQDPSLARPMTSNRGAGFTSAPNKKFDPLNRSMGSTLGSSGGGAMLVARKGDT
SPEEQARGMEKTVHELLEKSAADAAKNDINSALENAMEAKKNERKLCRFREQNNMADQIN
LELMYAVDFNLAHMYHMNKNYSEALNLYTAIVRNKNFPQSGWLRVNMGNIHFEQKKYPSA
IKMYRMALDQISATAKEVRFKIMRNIGLSFVRMGQYPDALQSFATVMDNVPDHQTGYNLV
MCNYALSDREGMKNAFIKLLKVSPPSEMDDDDDDDPMGDDDMQVMTMDDGLKDEMRKRNT
IITRLIVKAAQLISEKVDRANGFEGGFMWCCEQLRDAGYTKLANEVELAKATRFMGQKQF
DKAVGVFKDFEKKEPRVKARAATNLAFLYFLEGETDQADKYSEMALKSDRYNARAYVNKG
CVLVERGDLEGARSLFNEAAGIDPYCVEAIYNLGLVSQRLNELPYALAAFKKLHNMVPDN
VEVIHQIATTYDMMGDFKNAVKWFELLTSLVSNDPGVLARLGAIHARFDDEAKALHYYQE
SHRVYPVNMDVISWLGAYHVKSEVYEKAMPFFDLASKIQPQEVKWALMVASCYRRTNNLP
AALGKYKQIHTQHPDNVECLRYLVHLCSELGRRAEAAEYMTKLKKAEKAAVPEATTAAAP
AAAAAGSGMGGMGGLDDDIGSSAVSAQNRGKKMLVKEHMGGGGGKDNDDWGNEQLGDDLL
PM
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgggggcacggaggaggatgacctttatggaggatatgatgagcaatcgaac
ccgcttgcgggctcgggtggtgccgcatttaaggcacttggggccgatggagctcctcca
ggcaccgccatgatggggccgcctggcacggccatgaagagcttcgtgccaggcacggct
atgcggggcggcacggcgatgcagcaggaccccagcctggcgcggcctatgacctcgaac
cggggtgctggcttcacgtcggcgcctaacaagaagtttgaccccctcaatcgctcaatg
gggtcgacactgggctcgtcggggggtggcgcaatgctggtggctcgcaagggtgacacc
agcccggaggagcaggcgcgcgggatggagaagacggtgcatgagctgcttgagaagagc
gcggcggacgcggctaagaatgacatcaactcggccctggagaacgccatggaggcgaag
aagaatgagcgaaagctgtgccgcttccgggaacagaacaacatggcggaccagatcaac
ctggagctgatgtacgccgtggacttcaacctggcacacatgtaccacatgaacaagaac
tacagcgaggcgctgaacctgtacacagccatcgtgcgcaacaagaacttcccgcagtcg
ggttggctgcgcgtcaacatgggcaacatccacttcgagcagaagaagtacccctccgcc
atcaagatgtaccgcatggcgttggaccagatcagcgccaccgccaaggaggtccgcttc
aagatcatgcgcaacatcgggctgtcgttcgtgcgcatgggccagtaccccgacgcgctg
cagtccttcgccacggtcatggacaacgtgcccgaccaccagaccggctacaacctggtc
atgtgcaactacgcgctgagcgaccgcgagggcatgaagaacgccttcatcaagctgctc
aaggtgagcccacccagcgagatggatgacgatgacgacgacgaccccatgggcgatgac
gacatgcaagtgatgaccatggatgacgggctgaaggacgagatgcgcaagcgcaacacc
atcatcacgcgcctcattgtcaaggccgcgcagctcatctccgagaaggtggatcgcgcc
aacggctttgagggcggcttcatgtggtgctgcgagcagctgcgcgacgcgggctacacc
aagctggccaacgaggtggagctggccaaggcgacccggttcatggggcaaaagcagttt
gacaaagccgtgggcgtgttcaaggactttgagaagaaggagccgcgcgtcaaggcgcgc
gccgccaccaacctggcgttcctgtacttcctggagggcgagaccgaccaggccgacaag
tacagcgagatggcgctcaagagcgaccgctacaacgcacgagcctacgtcaacaaggga
tgcgtgctggtggagcgcggcgatctggagggagcgcgaagcctgttcaacgaggctgcc
ggcatcgacccctactgcgtggaggccatctacaacctgggcctggtgagccagcgcctg
aacgagctgccgtacgcgctggcggcgttcaagaagctgcacaacatggtgcccgacaac
gtggaggtcatccaccagatcgccaccacgtacgacatgatgggcgacttcaagaacgcg
gtcaagtggtttgagctgctcacctcgctggtcagcaacgaccccggcgtgctggcgcga
ctgggagccatccacgccaggttcgacgacgaggccaaggcgctgcactactaccaggag
tcgcaccgcgtgtacccggtgaacatggacgtcatctcctggctgggcgcctaccatgtc
aaatcggaggtgtacgagaaggccatgcccttctttgacctggcctccaagatccagccg
caggaggtcaagtgggcgctcatggtggcgtcctgctaccgccgcaccaacaacctgccc
gccgcgctgggcaagtacaagcaaatccacacgcagcaccccgacaacgttgagtgcctg
cgctacctggtgcacctgtgctccgagctgggccgccgcgccgaggccgccgagtacatg
accaagctcaaaaaggcggagaaggcggcggtgcccgaggcaacgacagcggcggcgccc
gccgcggccgcagctggcagtggcatgggtggcatgggcggcctggacgacgacattggc
agcagcgcggtgtcggcgcagaaccgcggcaagaagatgctggtcaaagagcacatgggt
ggcggcggtggcaaggacaacgacgactggggaaacgagcagcttggggacgacctgctg
cccatgtaa
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integrated database retrieval system
