Magallana gigas (Pacific oyster): 105320107
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Entry
105320107 CDS
T03920
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105320107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105320107
03036 Chromosome and associated proteins [BR:
crg03036
]
105320107
Spliceosome [BR:
crg03041
]
Complex B
Other components
Prp19-related factors
105320107
Complex C
105320107
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
105320107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_CcmH_CycH
TPR_16
Mad3_BUB1_I
TPR_17
TPR_9
U3_assoc_6
KilA-N
Motif
Other DBs
NCBI-GeneID:
105320107
NCBI-ProteinID:
XP_011416206
LinkDB
All DBs
Position
6:44443449..44448595
Genome browser
AA seq
682 aa
AA seq
DB search
MDVDEEGGKRKMPKVAKVKNKMPAPVQITAEQLLREAKERELELVPPPPKQKISDPDELK
DYQRRKRKAFEDNIRKNRNLMTNWIKYAQWEESQKEIQRARSVFERGLDVDHRNITVWLK
YAEMEMRARQLNHARNIWDRAITILPRANQFWYKYTYMEEMLGHIAGARQVFERWMEWEP
EEQAWHSYINFELRYKELDRARMIYERFVLIHPEVKNWIKYARFEEKHGYINSARRVYER
AVEFFGEDNMDEKLIIAFARFEEGQREHERARVIYKYALDVLPKDQCQEIYKAYTVHEKK
FGSRAAIEDVIVSKRRFQYEEEVKANPLNYDAWFDYIRLLEADANTEQVRDTYERAIANI
PPSKEKRHWRRYIYLWINYALYEELEAEDMERTRDVYKACLDIIPHKNFTFAKVWLLFAH
FEVRQKNLQGTRRILGTAIGKCPKNKLYRGYIELELQLREFERCRILYEKFLEFGPENCT
SWMKYAELETILGDTERAEAIYELAINQPKLDMPEVLWKAYIDFQIEQEEYDKTRKLYRR
LLERTQHVKVWISFANFELSIQSENGENVINTRKVYSEGNKSLKNINEKEERLMLLESWQ
EMERDQGDEESQAKVQKLMPQKVKKRRKIQTEDGSDAGWEEYYDYIFPDEEAAQPNLKLL
AMAKKWKQVQETTPAEEEEEVG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgacgaggaaggaggaaagagaaaaatgccgaaagtggccaaggttaagaat
aaaatgcctgctccagtgcagattacagcagaacagcttttaagagaagcaaaggagaga
gaattggagttagttcccccacctcctaagcagaagatatcagatcctgatgagctcaaa
gattatcaaagaagaaaaaggaaggcttttgaggacaatattcgcaaaaatagaaacctg
atgactaattggataaagtatgcacagtgggaagaatcacaaaaagaaattcagagggca
cggtcagtttttgagagaggtttggatgtggatcacagaaacataacagtgtggctcaaa
tatgcagaaatggagatgagagctcgacaattgaaccatgccagaaatatatgggataga
gccattacaattcttcccagggctaatcagttctggtacaagtatacttacatggaggaa
atgctgggacacattgcaggtgcccgacaagtgttcgagcgctggatggagtgggagcct
gaggaacaagcctggcattcgtatatcaactttgagctgcgttacaaggaattagacaga
gcaaggatgatatatgagagatttgttcttatccatccggaggtaaagaactggattaag
tatgctcggtttgaggagaagcatggctacattaatagtgcaagaagagtttacgagagg
gccgttgagttctttggagaggacaacatggatgaaaaactcatcattgcttttgccagg
tttgaggagggacaaagagagcatgagagggcgagagtgatatacaaatatgccctggat
gtcttacccaaagatcagtgtcaggaaatctacaaagcttacacagttcatgaaaaaaaa
ttcggaagcagggcagccatcgaagatgttattgttagcaaaaggaggtttcaatatgaa
gaggaagtgaaagcaaatccattgaattatgatgcctggtttgactacataagattgtta
gaggccgatgctaacactgaacaagtgagggacacatatgaaagggccattgcaaatata
ccaccctcaaaggaaaaacgtcattggcgtcgatacatatacttatggatcaattacgca
ctgtatgaggagctggaggcggaggatatggagaggaccagggatgtctataaagcctgt
ctggacatcattcctcacaaaaacttcacctttgccaaagtctggcttttattcgctcat
tttgaagtccgccagaaaaatctacagggtacaagaagaattctgggcacagctattggg
aaatgtccaaagaacaagctctacagaggttacatagagttggagctacaattacgagag
tttgagagatgcaggatcctgtatgaaaagttcctggagtttggaccagaaaactgtact
tcttggatgaagtatgcagaattggagactattcttggagacacggagagagctgaagca
atatatgagctggccatcaaccaacccaagctagacatgcctgaggtgctgtggaaggca
tacattgacttccagattgagcaagaggagtatgacaagactcgcaaactgtacagaagg
ctgctggaacgaactcaacatgtcaaggtatggataagctttgccaactttgagctgtca
attcagagtgaaaatggagagaatgtgataaataccagaaaggtttacagtgaagggaac
aagtctctgaagaacatcaatgaaaaggaagagagactgatgttactggagtcctggcag
gaaatggagagagaccagggcgatgaggaatctcaggcgaaggttcagaaactgatgccg
cagaaggtgaagaagaggaggaagatccagactgaggatgggtctgatgctggatgggag
gaatactatgactacattttcccagacgaggaggcggctcaacccaatctcaaacttctg
gccatggccaagaaatggaaacaagtacaggaaacaaccccggcagaagaggaagaggaa
gtgggctga
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