Crassostrea gigas (Pacific oyster): 105322492
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Entry
105322492 CDS
T03920
Name
(RefSeq) integrin beta-1-B-like precursor
KO
K05719
integrin beta 1
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg04145
Phagosome
crg04512
ECM-receptor interaction
crg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
105322492
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105322492
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105322492
09142 Cell motility
04820 Cytoskeleton in muscle cells
105322492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105322492
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105322492
04515 Cell adhesion molecules [BR:
crg04515
]
105322492
04090 CD molecules [BR:
crg04090
]
105322492
Membrane trafficking [BR:
crg04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
105322492
Exosome [BR:
crg04147
]
Exosomal proteins
Proteins found in most exosomes
105322492
Cell adhesion molecules [BR:
crg04515
]
Integrins
Integrin beta subunits
105322492
CD molecules [BR:
crg04090
]
Proteins
105322492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_2
I-EGF_1
Nop5_N
MIG-14_Wnt-bd
Collectrin
Motif
Other DBs
NCBI-GeneID:
105322492
NCBI-ProteinID:
NP_001292309
UniProt:
Q95P95
LinkDB
All DBs
Position
LG9:13739225..13760555
Genome browser
AA seq
799 aa
AA seq
DB search
MVSTVWFLCFTTIFCSLNPIGKLSAQDLRSDTLTPTQENPCLKEKTTTCGECIAISTLCA
FCTDAEYDANNYPRCDLLTTHQKLINNKPRCKDIVNPSSTLVKSRDDRLIDGDRDRYAVQ
IRPQQIDLELRPNDPQTFNLTFRLAENYPVDLYYLMDLSNSMADDKEKLASLGVKIAEDM
STITKNFKLGFGSFVDKVVMPYVSTAPNKINSPCPGCEKAYGFRNVHPLDPNATLFRDKV
NAAKVSGNLDAPEGGFDAIMQAIACETEIGWRNRSRRMLLFSTDAGFHYAGDGELGGIIQ
PNDGNCHLSPDGMYTESSNQDYPSISQVAVKAKEKNVNIIFAVTNDQKNIYDQLKPIIAG
SETGVLASDSQNVVKLVRDNYLAITSKVEMIVENSDNLEVKFRTKCKGTEEKETNKCENL
AIGGSVDFSVTVEVKSCPPKGEEERTLRIKPVGLYDDLTVKLKLMCQCDCESPKQMEDNK
NHEKCNGNGTYVCGMCVCNEPYFGDYCDCDKGTGTIADKESECIQDKNTTIICNGRGECN
CGTCTCRERQKGTNHFYTGRYCECDDYSCPYYAGLICGGLGRGQCDCGNCKCNAGFNGTN
CGCNTDNSTCMYNGLLCNDKGTCECGKCTCTDPKYFGPQCQECDNCGQEQCRTHQDCALC
NRTNAGVLTKEQCEKECSHTTAVDKIRNGITNCEYVDQNGCFIYFTYFYDDDGTLRVEVQ
KEPECPPEVNVLAIVLGVIAGIVFFGIILLLIWKLFTTISDKRELARFEKEAMNARWDTG
ENPIYKQATSTFVNPTYRQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggtatcgacggtttggtttttatgttttacaacaattttctgttccctaaatcctatc
gggaaattgagtgcacaagatttacgatctgatactttgacgcctacacaggaaaacccg
tgcctgaaggaaaagaccacaacatgtggggagtgtatagcaatatctaccctgtgtgca
ttctgtaccgacgctgagtatgacgccaacaattatcccaggtgtgacctactgaccact
catcagaaactcatcaacaacaagcccaggtgtaaagacatcgtcaatccgtcatcaacc
ctcgtaaagagcagggatgacagattgattgatggcgatagggacagatatgccgtacag
atcagaccccagcaaatcgacctggagttacgtccaaatgaccctcagacatttaatctg
acgttccgattggctgagaactatccagtcgacctctactaccttatggacctctcaaac
tcaatggcagacgacaaagaaaaactggccagccttggagtcaagatagctgaagacatg
agcaccatcactaagaacttcaagctgggttttggttcctttgtggacaaggttgtcatg
ccctacgtcagtacagcccctaataaaattaacagtccttgtccaggatgtgagaaggct
tatggatttagaaacgttcacccattggacccaaatgctacactgttcagggacaaagtc
aatgcagccaaggtatctggtaaccttgatgctccggagggtgggttcgacgccatcatg
caggccatagcttgtgagacagagattgggtggaggaaccgatccagaagaatgttgctg
ttctccacagacgctggatttcattacgctggggacggagaacttggaggcatcattcaa
cccaatgatggaaactgtcatcttagtcctgacggaatgtacacagaaagttctaatcag
gactacccctctattagtcaagtcgcggtgaaagccaaggaaaagaatgtcaacatcatt
ttcgccgtcaccaacgatcaaaagaacatttatgatcagctcaagccaatcattgcggga
tcggaaacaggagttttggcgtcagactcacagaacgttgtcaagctagtcagagacaac
tacttggccatcacatcaaaagtagaaatgattgttgaaaactcagacaatttggaggtg
aaattcaggacaaaatgtaaaggaactgaagagaaagagacaaacaagtgtgagaacttg
gccattggaggatctgtggatttcagtgtgacagtggaagtgaagagctgcccccccaaa
ggtgaagaggagaggaccctcaggatcaaaccagtcggactgtatgatgatttgactgtc
aaactgaagctcatgtgtcagtgtgactgcgagtccccaaagcaaatggaagacaacaag
aaccacgagaaatgtaatggaaacgggacgtacgtgtgtggaatgtgcgtgtgtaacgag
ccgtactttggagactattgtgactgtgacaagggcaccgggaccatcgctgacaaggag
tcggagtgtatccaggacaagaacacgaccatcatctgtaacggccggggagaatgtaac
tgcggaacgtgcacgtgtcgggagagacagaagggcaccaaccacttctacacgggcaga
tactgcgagtgtgacgattacagctgtccctactacgctgggctgatctgtggaggtctg
ggtcgcggacagtgtgactgtggaaactgtaagtgtaacgccggtttcaatggcacgaac
tgcggatgtaacaccgacaactctacctgtatgtacaatggattgctgtgtaatgataaa
ggaacttgtgagtgtggcaagtgtacctgtactgatcctaagtactttggaccccagtgt
caggaatgtgataactgtggccaggagcaatgtcgtacccaccaggactgtgcgctgtgt
aacagaaccaatgccggggtactgaccaaggaacagtgtgaaaaagagtgctcccatacc
actgccgtcgacaaaatcagaaatggcatcactaattgcgagtacgtagaccagaacggc
tgctttatttactttacctatttctatgacgatgatggcacactgagggtagaagtccaa
aaagagccagagtgtccccccgaggtcaacgtccttgccatagtcctgggggtgatagcg
ggcatcgtgttctttgggatcatcctcctcctgatctggaaactattcaccaccattagt
gataagagagagctggccaggttcgaaaaggaggccatgaacgcccgatgggatacggga
gaaaatcctatctacaagcaggctacatccacctttgtcaaccccacctacaggcagtga
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integrated database retrieval system