Magallana gigas (Pacific oyster): 105334565
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Entry
105334565 CDS
T03920
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04120
Ubiquitin mediated proteolysis
crg04137
Mitophagy - animal
crg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105334565
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105334565
04137 Mitophagy - animal
105334565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
105334565
Ubiquitin system [BR:
crg04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
105334565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
105334565
NCBI-ProteinID:
XP_011436382
UniProt:
Q75W47
LinkDB
All DBs
Position
6:complement(9434164..9437035)
Genome browser
AA seq
685 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaagaccctcactggcaagaccattacacttgaagtagagccctcg
gacaccattgaaaatgtcaaggccaagattcaggacaaagaaggaattcccccagatcag
cagagattgatcttcgctggaaaacagttggaagatggccgcactctctctgactacaac
attcagaaggaatccaccctccatttggtcctgcgtctgagaggaggtatgcaaatcttt
gtcaaaacactgactggcaaaaccatcacactggaagtggagccctcagacaccatagaa
aacgtcaaggccaagatccaggacaaagaaggaattcccccagatcagcagagattgatc
ttcgccggtaaacagctggaagatggtcgcacactctctgactacaacattcagaaagaa
tccaccctccatttggtcttgcgtctgagaggaggtatgcaaatctttgtcaaaacactg
actggcaaaaccatcacactggaagtggagccctcagacaccattgaaaacgtcaaggcc
aagatccaggacaaagaaggaattcccccagatcagcagagattgatcttcgccggaaaa
cagctggaagatggccgcactctctccgactacaacattcagaaggaatccaccctccat
ttggtcttgcgtctgagaggaggtatgcaaatctttgtcaaaacactgactggcaaaacc
atcacactggaagtggagccctcagacaccattgaaaatgtcaaggccaagatccaggac
aaagaaggaattcccccagatcagcagagattgatcttcgccggtaaacagctggaagat
ggtcgcactctctccgactacaacattcagaaggaatccaccctccatttggtcttgcgt
ctgagaggaggtatgcaaatctttgtcaaaacactgactggcaaaaccatcacactggaa
gtggagccctcagacaccattgaaaacgtcaaggccaagatccaggacaaagaaggaatt
cccccagatcagcagagattgatcttcgccggtaaacagctggaagatggtcgcacactc
tctgactacaacattcagaaagaatccaccctccatttggtcttgcgtctgagaggaggt
atgcaaatctttgtcaaaacactgactggcaaaaccatcacactggaagtggagccctcg
gacaccattgaaaatgtcaaagccaagatccaggacaaagaaggaattcccccagatcag
cagagattgatcttcgccggtaaacagctggaagatggtcgcactctctctgactacaac
attcagaaggaatccacccttcatttggtcttgcgtctgagaggaggtatgcaaatcttt
gtcaaaacgctgactggcaaaaccatcacactggaagtggagccctcagacaccattgaa
aatgtcaaagccaagatacaggacaaagaaggaattcccccagatcagcagagattgatc
ttcgccggtaaacagctggaagatggtcgcactctctccgactacaacattcagaaagaa
tccaccctccatttggtcttgcgtctgagaggaggtatgcaaatctttgtcaaaacactg
actggcaaaaccatcacactggaagtggagccctcagacaccattgaaaatgtcaaagcc
aagatccaggacaaagaaggaattcccccagatcagcagagattgatcttcgccggtaaa
cagctggaagatggtcgcactctctccgactacaacattcagaaggaatccaccctccat
ttggtcttgcgtctgagaggaggtatgcaaatctttgtcaaaacactgactggcaaaacc
atcacactagaagtggagccctcagacaccattgaaaatgtcaaggccaagatccaggac
aaagaaggaattcccccagatcagcagagattgatcttcgccggtaaacagctggaagat
ggtcgcactctctccgactacaacattcagaaggaatccaccctccatttggtcttgcgt
ctgagaggaggaaattaa
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