KEGG   Crassostrea gigas (Pacific oyster): 105336099
Entry
105336099         CDS       T03920                                 
Name
(RefSeq) toll-like receptor 4
  KO
K10160  toll-like receptor 4
Organism
crg  Crassostrea gigas (Pacific oyster)
Pathway
crg04145  Phagosome
Brite
KEGG Orthology (KO) [BR:crg00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    105336099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crg04131]
    105336099
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:crg04054]
    105336099
   04090 CD molecules [BR:crg04090]
    105336099
   00536 Glycosaminoglycan binding proteins [BR:crg00536]
    105336099
Membrane trafficking [BR:crg04131]
 Endocytosis
  Phagocytosis
   Toll-like receptors
    105336099
Pattern recognition receptors [BR:crg04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   105336099
CD molecules [BR:crg04090]
 Proteins
  105336099
Glycosaminoglycan binding proteins [BR:crg00536]
 Hyaluronan
  Cell surface receptors
   105336099
SSDB
Motif
Pfam: LRR_8 LRR_4 TIR TIR_2 LRR_9 LRRNT
Other DBs
NCBI-GeneID: 105336099
NCBI-ProteinID: XP_011438586
LinkDB
Position
LG5:complement(38254970..38258233)
AA seq 870 aa
MEKELKLDLFLCKSLLYLLLITNATFSKTTWNVCQFRSVECVCQNVPNNQLKVDCSGRRL
LNIPTFSSSVIWVDLSNNLIEEITSGFPKNVRYIDLSANKIQHLDGQPFLGLFHLKTLNL
ERNVLNISLLYQGVFSDLHSLTELSFKGNIRNEITETVIKDEVFAELSSLKTLKIDGSPN
ATFGKGFANLTHLQNLDLSGITGNCSLKKISRNMFLYLTRLVYIDVSACSVLDIEKGTFG
KLRKLKHLDVSHNRELGFASLPNITHNLKDTSIKTLRANGINCLTGMGTMILKRHLENLK
HTNISEIYFEKNRLEQLEPQALRLLPINLTLISFGENKLTTGRYLIDFSFLQNIRVYNMS
LQLRPPPYPESIFDTCKEKSDVLAAKFDVSETKRAPLSFLPSKSWHLNWTIILPKSLKVL
YANMSRLFSRIPECGINATGLRELYIQDNFLFSWDGPVRGIENVEIADMSNNYCSHISKS
FLNYAKGVKFLKMSKNDIGKSLSNDIEGEIFKNTKSLEVLDLSYNNIIALSELVFKNMPQ
LQILNLQNNQISIWRVKINHMKNMKFINLKQNKLTTFEMDARKSFENLFQTSNLMIDLSE
NQVLCSCKTADFLEWITLHKNHFKNIKRYECSLSSSQKFNFSDVEASSVLLKENCKSNLI
KYICSAASVVLFFSVVIYILVKKKWELKDVFFKILNIFKNVFCYEDNQSEDGSFHAMISY
AEKDLPIVLKYVVPNLEAQHNFKLFVRHRDDPHAGMTINAIRNSIKNSGKAVCLVTKNYL
KSKRQCFELAMIRKHMESHTDQEEVLINNQENLDHNQENFLCRIIRFPNVSIPDEISNLD
NNIIDCPEEDGNNDHFWRELRDALGGNINL
NT seq 2613 nt   +upstreamnt  +downstreamnt
atggaaaaagaactcaagctggatttgttcttgtgcaaaagccttttgtatttacttctg
attacaaatgctactttcagtaaaacgacatggaacgtatgtcaatttagatcagttgaa
tgtgtttgccagaatgttccaaataatcaactgaaagttgattgttccggaaggcgactc
ctaaacattccaacattttcctcaagtgtaatatgggtcgacttaagtaataatcttata
gaagaaattaccagtgggtttccaaagaatgttcgctacatcgatttatctgcaaataag
atacaacatcttgatggtcaaccatttcttggattatttcatttaaaaactttgaattta
gaaagaaatgtgcttaatatatcattactatatcaaggtgtattttctgatcttcattct
cttactgaattaagttttaaaggaaatataagaaacgaaattacagaaacggtcataaaa
gacgaagtctttgcagagctgagttcattaaaaactctgaaaattgacggatcacctaat
gccacatttggaaaagggtttgcaaatcttacacacctccaaaatctagatttgtcagga
attacaggaaattgcagtttaaaaaaaatttctcgaaatatgtttttatatttgacacga
cttgtctacattgacgtttctgcttgcagtgttttggatattgaaaaaggcacatttgga
aagcttcgtaaacttaaacaccttgatgtatctcataacagggaacttggatttgcgtca
cttccaaatataactcataatctaaaggacacttcgattaaaacattgcgcgctaatgga
ataaactgtttgacaggaatgggtacaatgattttgaaacgtcatctggagaacttgaaa
cacacaaacatttctgaaatctactttgaaaagaacagactagaacaacttgaaccacaa
gcacttcgactcttacccatcaatttaacattaatttcttttggagagaataaacttacg
actggaagatatctcatagatttttcctttttgcaaaatatacgtgtttataatatgagc
ctgcagctccgtccacctccatatccggaatcgatatttgatacttgcaaagaaaaatca
gatgtcttagctgcaaagtttgatgtgtctgaaactaaaagagctcccttgagctttctt
ccttccaaaagttggcacttgaattggacaattattttaccaaaaagtctaaaggtttta
tatgcaaatatgagtcgactttttagcagaatacctgaatgtggtataaatgcaactggc
ttaagagaactttacatacaagacaattttttgttttcctgggatggtccagttcggggc
attgaaaatgtagaaatagccgacatgtctaacaattattgctcacacatctcaaaatcg
ttcttaaactacgcgaaaggcgtaaagttcttaaaaatgtcaaaaaatgatattggtaaa
agcctgtcgaacgatattgagggagaaatctttaaaaacactaaatcgttagaagttctt
gatctgtcgtacaataatattattgctttatcagagttagtttttaaaaatatgccacaa
ttgcaaatattaaatttacaaaacaatcaaatatcgatttggcgagttaaaataaatcat
atgaaaaatatgaaattcatcaatctaaaacagaacaaactaacaacatttgaaatggac
gcgcgaaagtcattcgaaaatttatttcaaacatcaaaccttatgatagatttatctgaa
aaccaagtcttatgttcttgtaaaaccgcagattttctggaatggattacgcttcataaa
aatcactttaaaaacattaaacgctacgaatgttctttgtcaagttcacaaaaatttaat
ttttccgatgttgaagcttcttcagttttgttaaaggaaaactgtaaatcaaatctcatt
aaatatatttgtagtgctgcatcagttgtcctcttttttagcgtcgtcatttacattcta
gtgaaaaaaaaatgggaattaaaagatgttttttttaagattttaaacattttcaaaaat
gttttttgttatgaagataatcagtcagaggatggaagttttcatgcaatgatttcatat
gcagagaaagatttgccaattgttcttaaatatgtggtcccaaaccttgaagcccaacat
aattttaagttatttgtcaggcaccgtgatgatccacacgcggggatgaccataaacgcc
ataagaaattccattaaaaatagtggaaaagctgtatgtcttgtgacaaaaaactaccta
aaatcaaaaaggcaatgtttcgaattggccatgattagaaagcatatggaatcacataca
gatcaggaagaagtcctcatcaataaccaagaaaaccttgaccataaccaagaaaacttt
ttatgtcgcatcattcgttttccaaatgtatctattcctgatgaaatctctaatttggat
aacaatataatagattgtcctgaagaagatgggaataatgatcacttctggagagaattg
agggatgccttgggagggaatataaacttgtaa

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