Crassostrea gigas (Pacific oyster): 105336099
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Entry
105336099 CDS
T03920
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105336099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105336099
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
105336099
04090 CD molecules [BR:
crg04090
]
105336099
00536 Glycosaminoglycan binding proteins [BR:
crg00536
]
105336099
Membrane trafficking [BR:
crg04131
]
Endocytosis
Phagocytosis
Toll-like receptors
105336099
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
105336099
CD molecules [BR:
crg04090
]
Proteins
105336099
Glycosaminoglycan binding proteins [BR:
crg00536
]
Hyaluronan
Cell surface receptors
105336099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
105336099
NCBI-ProteinID:
XP_011438586
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All DBs
Position
LG5:complement(38254970..38258233)
Genome browser
AA seq
870 aa
AA seq
DB search
MEKELKLDLFLCKSLLYLLLITNATFSKTTWNVCQFRSVECVCQNVPNNQLKVDCSGRRL
LNIPTFSSSVIWVDLSNNLIEEITSGFPKNVRYIDLSANKIQHLDGQPFLGLFHLKTLNL
ERNVLNISLLYQGVFSDLHSLTELSFKGNIRNEITETVIKDEVFAELSSLKTLKIDGSPN
ATFGKGFANLTHLQNLDLSGITGNCSLKKISRNMFLYLTRLVYIDVSACSVLDIEKGTFG
KLRKLKHLDVSHNRELGFASLPNITHNLKDTSIKTLRANGINCLTGMGTMILKRHLENLK
HTNISEIYFEKNRLEQLEPQALRLLPINLTLISFGENKLTTGRYLIDFSFLQNIRVYNMS
LQLRPPPYPESIFDTCKEKSDVLAAKFDVSETKRAPLSFLPSKSWHLNWTIILPKSLKVL
YANMSRLFSRIPECGINATGLRELYIQDNFLFSWDGPVRGIENVEIADMSNNYCSHISKS
FLNYAKGVKFLKMSKNDIGKSLSNDIEGEIFKNTKSLEVLDLSYNNIIALSELVFKNMPQ
LQILNLQNNQISIWRVKINHMKNMKFINLKQNKLTTFEMDARKSFENLFQTSNLMIDLSE
NQVLCSCKTADFLEWITLHKNHFKNIKRYECSLSSSQKFNFSDVEASSVLLKENCKSNLI
KYICSAASVVLFFSVVIYILVKKKWELKDVFFKILNIFKNVFCYEDNQSEDGSFHAMISY
AEKDLPIVLKYVVPNLEAQHNFKLFVRHRDDPHAGMTINAIRNSIKNSGKAVCLVTKNYL
KSKRQCFELAMIRKHMESHTDQEEVLINNQENLDHNQENFLCRIIRFPNVSIPDEISNLD
NNIIDCPEEDGNNDHFWRELRDALGGNINL
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaactcaagctggatttgttcttgtgcaaaagccttttgtatttacttctg
attacaaatgctactttcagtaaaacgacatggaacgtatgtcaatttagatcagttgaa
tgtgtttgccagaatgttccaaataatcaactgaaagttgattgttccggaaggcgactc
ctaaacattccaacattttcctcaagtgtaatatgggtcgacttaagtaataatcttata
gaagaaattaccagtgggtttccaaagaatgttcgctacatcgatttatctgcaaataag
atacaacatcttgatggtcaaccatttcttggattatttcatttaaaaactttgaattta
gaaagaaatgtgcttaatatatcattactatatcaaggtgtattttctgatcttcattct
cttactgaattaagttttaaaggaaatataagaaacgaaattacagaaacggtcataaaa
gacgaagtctttgcagagctgagttcattaaaaactctgaaaattgacggatcacctaat
gccacatttggaaaagggtttgcaaatcttacacacctccaaaatctagatttgtcagga
attacaggaaattgcagtttaaaaaaaatttctcgaaatatgtttttatatttgacacga
cttgtctacattgacgtttctgcttgcagtgttttggatattgaaaaaggcacatttgga
aagcttcgtaaacttaaacaccttgatgtatctcataacagggaacttggatttgcgtca
cttccaaatataactcataatctaaaggacacttcgattaaaacattgcgcgctaatgga
ataaactgtttgacaggaatgggtacaatgattttgaaacgtcatctggagaacttgaaa
cacacaaacatttctgaaatctactttgaaaagaacagactagaacaacttgaaccacaa
gcacttcgactcttacccatcaatttaacattaatttcttttggagagaataaacttacg
actggaagatatctcatagatttttcctttttgcaaaatatacgtgtttataatatgagc
ctgcagctccgtccacctccatatccggaatcgatatttgatacttgcaaagaaaaatca
gatgtcttagctgcaaagtttgatgtgtctgaaactaaaagagctcccttgagctttctt
ccttccaaaagttggcacttgaattggacaattattttaccaaaaagtctaaaggtttta
tatgcaaatatgagtcgactttttagcagaatacctgaatgtggtataaatgcaactggc
ttaagagaactttacatacaagacaattttttgttttcctgggatggtccagttcggggc
attgaaaatgtagaaatagccgacatgtctaacaattattgctcacacatctcaaaatcg
ttcttaaactacgcgaaaggcgtaaagttcttaaaaatgtcaaaaaatgatattggtaaa
agcctgtcgaacgatattgagggagaaatctttaaaaacactaaatcgttagaagttctt
gatctgtcgtacaataatattattgctttatcagagttagtttttaaaaatatgccacaa
ttgcaaatattaaatttacaaaacaatcaaatatcgatttggcgagttaaaataaatcat
atgaaaaatatgaaattcatcaatctaaaacagaacaaactaacaacatttgaaatggac
gcgcgaaagtcattcgaaaatttatttcaaacatcaaaccttatgatagatttatctgaa
aaccaagtcttatgttcttgtaaaaccgcagattttctggaatggattacgcttcataaa
aatcactttaaaaacattaaacgctacgaatgttctttgtcaagttcacaaaaatttaat
ttttccgatgttgaagcttcttcagttttgttaaaggaaaactgtaaatcaaatctcatt
aaatatatttgtagtgctgcatcagttgtcctcttttttagcgtcgtcatttacattcta
gtgaaaaaaaaatgggaattaaaagatgttttttttaagattttaaacattttcaaaaat
gttttttgttatgaagataatcagtcagaggatggaagttttcatgcaatgatttcatat
gcagagaaagatttgccaattgttcttaaatatgtggtcccaaaccttgaagcccaacat
aattttaagttatttgtcaggcaccgtgatgatccacacgcggggatgaccataaacgcc
ataagaaattccattaaaaatagtggaaaagctgtatgtcttgtgacaaaaaactaccta
aaatcaaaaaggcaatgtttcgaattggccatgattagaaagcatatggaatcacataca
gatcaggaagaagtcctcatcaataaccaagaaaaccttgaccataaccaagaaaacttt
ttatgtcgcatcattcgttttccaaatgtatctattcctgatgaaatctctaatttggat
aacaatataatagattgtcctgaagaagatgggaataatgatcacttctggagagaattg
agggatgccttgggagggaatataaacttgtaa
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