Magallana gigas (Pacific oyster): 105340762
Help
Entry
105340762 CDS
T03920
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105340762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crg03041
]
105340762
Spliceosome [BR:
crg03041
]
Complex A
U1 snRNP components
U1 related factors
105340762
Complex B
105340762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
105340762
NCBI-ProteinID:
XP_065928815
LinkDB
All DBs
Position
10:5007811..5023043
Genome browser
AA seq
850 aa
AA seq
DB search
MAQNNGPPGPPNPMMRPPPYGMPPGANFMPPPMGAPDMPAPPMMGGPPGFQPPSGNIPPP
HYPPPGGMPPMGMPPAFPTPGGSNPQVQSVSQSNSASNSPLGDKQDKKVWTEHKAPDGRT
YYYNHISKQSSWEKPDDLKSKAELMLSNCPWKEYKSDSGKIYFHNSQTKESRWTKPKELE
ELEEMVAKKTQEGALSSTDPGPVIAAPPTTVAPPPAGSITLPQQPAKPSSAIQAAMQATL
ASIKLPPPTPTTKIEKEMKEISDEEEEKPKKEVVPLVFKNKKEAMDAFKSLLKEKGVSST
ASWEQALKLIVNDPRYGALKQLNERKQAFNEYKTKRAKEEKEEQRLRAKQAKEDLEHFLL
HADKMNSSVKYWKADDLFGDQDVWRRVDDRDRREIFDDVVHMLAKKEKEESKSLRKRNTK
VFTEILDSMPSLTHCTTWSEASQMLLDNPRFTEDPDLHNMDKEDALICFEEHIRLLEQEN
DDEKERERRRVKRQQRKNREGFLVLLDELHEQAKLNSMSLWMDLYRIISQDVRFTNMLGQ
PGSTPLDLFKFYVEDLKARFHDEKKIVKEILKEKGFMVEVSTVFEDFASQIASDRRASGL
DTGNIKLTFNSLIEKAEAREKERLKEEARKLRKLESQFRTALKQISPQIEPESKWEDVKE
KLEKDPVFEAITLESERIRLFKEYQAVLEDACSHHHAKRKKRKQKHKRSRSRSGSESDNE
TASVRSSSKHKSKKKKKTRSESRSRSPSNIPDSDHEDREREKKKRSHPESDQEEREKKKH
KKKSKKKKHVSHSASSASEDEEKQKSSSQSKPKKRKKNKGGDNGSSDSDLSEGELERRRN
QLLQQLEADQ
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaacaacggacctccgggaccgccaaatcctatgatgaggcctccaccttac
gggatgcctcccggggcgaacttcatgcccccaccaatgggagccccagacatgccagct
cctcctatgatgggagggccccctggtttccagcctccatcaggaaatattccaccccct
cactaccctccccctgggggtatgccacctatggggatgcctccagcctttccaacccca
ggaggcagtaacccacaggtccagtctgtttctcagtccaactctgcctcaaattcaccg
ctaggagacaaacaggataagaaggtatggacggaacacaaggcccccgatggtcgcaca
tactactacaatcacatcagcaagcagtccagctgggaaaaacctgacgacctgaaatcc
aaggcagagctgatgctgtctaactgcccctggaaggagtacaagtcagactcgggcaag
atctacttccacaactcacagaccaaggaatcccgctggaccaagcccaaggaactggag
gagttagaggaaatggtggccaagaagacacaagaaggtgcattaagcagcacagatccc
ggtccagtgattgcagcaccccccaccacagtagcaccgccccctgcaggcagcatcacg
ttaccgcagcaaccagccaaaccatcgtccgccattcaggctgccatgcaggcaacactg
gcctcaatcaagttaccaccccccactcctacaaccaagatagagaaagagatgaaagaa
atcagtgatgaagaagaagaaaagccgaaaaaagaggttgtcccacttgtgttcaaaaat
aaaaaagaggcgatggacgccttcaaaagtctgctgaaggagaagggtgtgtcctccaca
gcgagctgggagcaagcgcttaagctgatagtgaacgaccctcgatacggggcgctcaaa
cagctcaatgagcggaagcaagcttttaatgagtacaaaactaaaagagccaaggaggaa
aaggaggaacaaagattaagagcaaaacaagcaaaagaagacttggagcatttcttgttg
catgcagacaaaatgaattcaagtgtcaagtattggaaagctgacgacctgtttggagac
caggatgtgtggcgacgagttgacgatcgggatcggcgggaaatctttgacgacgttgtg
cacatgctggccaagaaagaaaaagaggaatcaaaatctttgagaaagaggaacaccaag
gtgtttacggagattctggacagcatgccgagtctgactcactgcactacgtggtctgag
gcctcacagatgttgctggacaacccaaggtttacagaggaccccgatctacacaatatg
gacaaagaggacgcactcatatgtttcgaggaacacattcgactgttggagcaagaaaat
gatgatgagaaagagagagagcgacggagagtgaaacgacagcagaggaaaaatagggag
ggattcctggttctactagatgagctgcatgagcaggcaaagctgaactccatgtctctg
tggatggacctctacagaatcatcagccaagatgtccgcttcaccaacatgttgggacaa
ccaggatccacacccctggacctctttaagttttatgttgaggatctgaaggctaggttt
catgatgagaagaaaattgtaaaagaaattctgaaggagaagggatttatggtagaagta
agcacagtgtttgaggacttcgcctcacagattgcgtcagacagaagagcctctggtctg
gatacagggaacatcaaactcacctttaacagtcttatagaaaaagcagaagcaagggag
aaagagagattgaaagaggaggctaggaagctgcgcaagttggagagtcagtttagaaca
gccttaaagcaaatcagcccacagattgagcctgaatctaagtgggaagatgtgaaggag
aagctagagaaggacccagtgtttgaggcgatcactctggagtcagagaggatccggctg
ttcaaggaataccaggctgtgttagaggatgcctgcagtcatcaccatgccaagcggaag
aagaggaagcagaaacacaagaggtccagatcacgatctgggagtgaatcagacaatgaa
acagcttcagtcagatcctcttccaaacacaagtcaaagaaaaagaagaaaactcgctcc
gaatctcgctcacggtctcctagcaacataccagactcagatcacgaggatcgtgaacga
gagaagaaaaagcgcagccatccagagtcagaccaggaggagagagagaagaagaaacac
aagaagaaatccaagaaaaagaagcatgtttctcatagcgcatccagtgccagtgaagat
gaagagaagcagaaaagttccagccaaagtaaacctaaaaaacgcaagaaaaacaagggt
ggagataacggctcctcagacagtgatctcagtgagggagagttagagaggagaaggaac
caacttctacaacagctcgaggcagatcagtaa
DBGET
integrated database retrieval system
