Crassostrea gigas (Pacific oyster): 105345320
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Entry
105345320 CDS
T03920
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg03008
Ribosome biogenesis in eukaryotes
crg03013
Nucleocytoplasmic transport
crg03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105345320
03008 Ribosome biogenesis in eukaryotes
105345320
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105345320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
105345320
03009 Ribosome biogenesis [BR:
crg03009
]
105345320
03016 Transfer RNA biogenesis [BR:
crg03016
]
105345320
03036 Chromosome and associated proteins [BR:
crg03036
]
105345320
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105345320
Ribosome biogenesis [BR:
crg03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
105345320
Pre-60S particles
105345320
Transfer RNA biogenesis [BR:
crg03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
105345320
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
105345320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Motif
Other DBs
NCBI-GeneID:
105345320
NCBI-ProteinID:
XP_011451739
LinkDB
All DBs
Position
LG3:16627301..16640684
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AA seq
1076 aa
AA seq
DB search
MPPITMTSVNLSEEAAKLLDFSQKLDITLLDNIVTMMYTGNGPQQRMAQEVLTTLKEHPD
SWTRVDTILEYSVNQQTKYYALQILENVIKTRWKVLPRAQCEGIKKYIVGLIIKTSSDAA
LLEKEKVYVGKLNMILVQILKYEWPRNWPSFISDIVGASKTNESLCQNNLAILKLLSEEV
FDFSSGQMTQAKAKHLKDSMCSEFSSIFQLCQFVMDNSQNAPLVGSTLETLLRFLNWIPL
GYIFETKLITTLIYKFLNVPLFRNITLKCLTEIAAVCVQQYDEQFVHLFNLTMTQLKQML
PLETNLKEAYQKGTDDEQKFIQNLSLFLCTYLKEHGQLIERKQDLHTVLLEALHYLILIS
EVEEVEIFKIALEYWNTLAADLYRESPFSSNTSPLLIGKPHHNDVPARRQLYTQVLSRVR
RVMISRMAKPEEVLIVENEQGEVVREFLKDTDSINLYKNMRETLVYLTHLDYNDTESIMT
EKLHHQVDGTEWSWKNLNTLCWAIGSISGAMHEDDEKRFLVTVIKDLLGLCEQKRGKDNK
AIVASNIMYVVGQYPRFLRAHWRFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRR
HFVQVQVGEVMPFIEEILNGINTIICDLQPQQVHTFYEAVGMMISAQNDQVAQEHLIERY
LLLPNQVWDGIINQATQNVEVLKDPDAVKQLGNILKTNVRACKALGHPYVVQLGRIYLDM
LNVYKVMSENISSAIATNGETVTKQPLIRSMRTVKKETLKLISGWVSRSTDPQMVAENFI
PPLLDAVLLDYQRNVSAAREPEVLSTMATIVNRLEGNITKDIPQIFDAVFECTLEMINKD
FEDFPEHRTNFFLLLQSVTAHCFQAYLNIPPEQFKLVLDSVIWAFKHTMRNVADTGLDIL
YTLLQNVANHEEAAQSFYQTYFTDILQHVFSVVTDSSHTAGLTIQATILAYMFSLLENGK
ITVTLAPTSGPSMQNVPYIQQFLMNLLKAAFPHLNEPQIKIFIEGLFSFDQDIAAFKEHL
RDFLVQIREFAGEDNQDLFLEEREQAIKQAQEEKRKIQMSVPGILGPHEIQEDMQD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaccgataactatgacttcggttaacctctctgaggaagcggccaaacttctggac
ttcagccagaagctggacattacgttactagataatattgtcacaatgatgtatacaggg
aatggtccacagcaaagaatggcacaggaagttttaacaactctcaaggaacacccagat
tcctggacaagagtggacacaatattagaatattccgtcaaccaacagaccaaatactac
gctcttcaaattctagaaaatgtcattaaaacacggtggaaagtcctacctagggctcaa
tgtgaaggcattaagaaatacattgtggggttaatcatcaaaacatcatcagatgctgcc
ttacttgagaaggagaaagtttatgtaggaaaactcaacatgatcttagtccagatttta
aaatatgagtggccaaggaattggccttcattcatcagtgacatcgttggagccagcaaa
acaaacgagtcattgtgtcaaaacaatctagcaattcttaaattgctcagtgaagaagtc
tttgacttcagcagtgggcagatgacgcaagctaaagccaaacatctgaaggacagcatg
tgcagtgaattctcctccattttccaattgtgtcaatttgtcatggacaactctcagaat
gcaccattggtgggatcgacattagaaacactcctgcgtttcctgaattggattcccctt
ggttacatatttgagaccaaactcatcacaacactcatttataagtttttgaatgttcca
ctattcagaaatattaccctcaagtgcttaacagaaatagctgctgtatgtgttcaacaa
tatgacgaacaatttgttcacttattcaatctcacaatgacccaattgaaacagatgctg
cctttggaaacaaatttgaaagaggcctaccagaaagggacagatgatgaacaaaagttt
attcagaacttgagtctgtttctgtgtacatacctgaaggaacatggccagctgattgag
aggaagcaagacttgcacactgtcctattagaggccttacactaccttatcctgatatca
gaagtcgaggaggttgagatatttaagatagccttagagtactggaacacgctggcagct
gacctgtacagagagagtccgttttcttccaacacgtccccactgctcattggcaaacct
caccacaatgacgtgccagccagacgacagctctacacacaagttctgtcaagggtacgg
agagttatgatttcccgaatggccaagcctgaagaagtcctgattgtagaaaatgaacaa
ggagaggtggtcagggaatttctcaaggatacagactccatcaacctttacaaaaacatg
agagagacactagtctacctgacacatttggactacaatgacacagagtctataatgaca
gaaaagctgcatcatcaggtcgacgggacagagtggtcatggaaaaacttgaacacattg
tgttgggctattggatccataagtggagccatgcatgaagatgatgagaagagattttta
gtcacagtcatcaaggacctgcttgggttgtgtgaacagaagaggggaaaggataacaag
gccattgtggcctccaacatcatgtacgtagtgggacagtacccccgcttcctaagggcc
cactggcggttcctcaaaacggtcgtcaacaagctgtttgagttcatgcatgaaacgcat
gatggtgtacaagatatggcttgtgacacttttatcaagatcgcacagaagtgtagaagg
cattttgtgcaagttcaggtgggagaagtaatgccattcattgaggaaattttgaatgga
ataaacacaatcatatgtgatttgcaaccgcaacaggtgcacacattctatgaggcggtg
gggatgatgatcagtgctcagaatgaccaggtggcccaggaacacctgatcgagcgctat
ctcctgttacctaaccaagtctgggacggaatcatcaaccaggccacacagaatgtggaa
gtcctaaaagaccctgacgctgtaaagcagctgggaaacattctcaagaccaatgtgcgg
gcctgcaaagccctcggccatccttatgtggtgcagctgggcagaatctacctagacatg
ctgaatgtgtacaaggtgatgagtgagaacattagtagtgcaatagccaccaacggagag
acggtcacgaagcagcccctgatccgcagcatgaggaccgtgaagaaggagaccctgaag
ctcatctccggctgggtcagtcgctccacggacccgcagatggttgcagagaatttcatc
ccaccattactagatgctgtgttgctagactatcagagaaatgtgtcggcagccagggag
ccagaggttctgagcacaatggccaccatagtcaacagattggagggcaatatcacaaag
gacatcccacaaatttttgatgctgtgtttgagtgtacactggaaatgatcaataaagac
tttgaagattttcccgagcaccgaacaaacttcttcttgttgttacaaagtgttactgct
cactgtttccaagcttacctgaatattcctccggagcagtttaagttagtgctggactct
gtgatttgggctttcaaacatacaatgaggaatgtggccgatacagggctggatatttta
tatactttgttacaaaatgtggcgaaccacgaagaggctgcacagagtttttatcagacc
tatttcactgacattttacagcatgtgttttctgttgtgacggatagttcccacactgca
ggactgacaatacaagccaccattttggcatacatgtttagtctgctggagaacggcaag
atcacagtgaccttggcaccaacctcagggccctctatgcagaatgtgccctacattcaa
cagttcctcatgaatctcctcaaggcagcattcccacacctaaacgagcctcagatcaaa
attttcattgagggcctcttcagttttgatcaggatatcgcagctttcaaggaacacttg
agggattttttggtgcaaataagggagtttgcaggggaagacaaccaggacctcttcctt
gaggagagagaacaggccatcaaacaggcccaggaagagaaacgcaaaattcagatgtct
gtgccaggaattctaggacctcacgaaattcaagaggacatgcaggactag
DBGET
integrated database retrieval system
