Chroicocephalus ridibundus (black-headed gull): 134508064
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Entry
134508064 CDS
T10910
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04141
Protein processing in endoplasmic reticulum
crid04210
Apoptosis
crid04217
Necroptosis
crid04218
Cellular senescence
crid04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134508064 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
134508064 (CAPN1)
04217 Necroptosis
134508064 (CAPN1)
04218 Cellular senescence
134508064 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134508064 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crid01002
]
134508064 (CAPN1)
Enzymes [BR:
crid01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
134508064 (CAPN1)
Peptidases and inhibitors [BR:
crid01002
]
Cysteine peptidases
Family C2: calpain family
134508064 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
DUF6009
Motif
Other DBs
NCBI-GeneID:
134508064
NCBI-ProteinID:
XP_063175202
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Position
31:complement(316332..323859)
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AA seq
715 aa
AA seq
DB search
MAEEPIVPVYCTGVSAQVQRQRAKALGLGQHENAVRYLGQDFGRLVEECRRSGTLFRDQT
FPPAPASLGFRELGPGTAKTHGVQWKRPTELCPRPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNETLLHRVVPHGQSFQHGYAGIFHFQIWQFGEWLDVVVDDYLPTKDGKLLFVHS
AEGTEFWSALLEKAYAKVNGCYEALSGGSTSEGFEDFTGGVTEWYDLRKPPADLYQIILK
ALERGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTGAKQINYRGQSLGLIRMRNPWGE
VEWTGPWSDSSSEWNAVEPALRQQLMVKMEDGEFWMSFRDFLREFTRLEICNLTPDALQS
RKFRKWNTRLYDGTWRRGSTAGGCRNYPATFWINPQFKIQLEEVDDEGDEGGGREPGCSF
LLALMQKHRRRERRYGKDMETIGFAVYEVPPEHVGKSGVHLKRDFFLANASRARSEQFIN
LREVSTRFRLPPGEYIVVPSTFEPNKEGDFVLRVFSEKKAGTEEMDDKIQATLPDEKVLS
ESQIDDNFKQLFKQLAGADMEISVTELQTILNRIIGKHKDLRTKGFSTESCRSMVNLMDK
DGNGKLGLVEFNILWNRIRNYLAIFRKFDLDKSGSMSAYEMRMALEAAGYKLNKKLHELI
ITRYAEPDLAIDFDNFVCCLVRLETMFRFFQAMDVDQDGVVTFDLLQWLQLTMFA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcccatcgtgccggtgtactgcactggcgtttcggcgcaggtgcagcgg
cagcgggcgaaggcgttggggttggggcagcacgagaacgcggtgcggtacctggggcag
gacttcgggcggctggtggaggaatgtcggcgttccggaaccctcttccgcgaccaaacc
ttcccgccggctcccgcctccctcggcttccgcgagctggggcccggcactgccaaaacc
cacggcgtccagtggaagaggccgacggagctgtgtccgcgcccgcagttcatcgtggac
ggggccacgcgcaccgacatctgccagggagcgctgggtgactgctggctgctggcggcc
atcgcctccctcacgctcaacgagaccctccttcaccgcgtggtgccgcacgggcagagc
ttccagcacggctacgccggcatcttccacttccagatttggcagttcggcgagtggctg
gacgtggtggtggacgactacttgcccaccaaagacggcaagctgctcttcgtccactcc
gccgagggcaccgagttctggagcgcccttttggagaaagcctacgccaaggtgaacggg
tgctacgaggcgctgtcgggcggcagcacctcagagggcttcgaggacttcacgggcggc
gtgacggagtggtacgacctgcgcaagccgccagccgatctctaccagatcatcctcaag
gcgctggagcgcggctccctgctcggctgctccatcgacataacgagcgccttcgacatg
gaggcggtgaccttcaagaagctggtgaagggacacgcgtactctgtgacgggggccaag
cagatcaactaccgcgggcaatcgctgggcctgatccgtatgcgcaatccctggggagaa
gtggagtggacgggaccctggagcgacagctcgtccgagtggaacgcggtggagccggcg
ctgaggcagcagctgatggtgaaaatggaggatggcgaattttggatgtccttccgggat
ttcctgcgggaattcacccgcctggagatctgcaacctcaccccagacgctctccaatcc
cgcaaattccgcaagtggaacacgcggctctacgacgggacgtggcggcgcggcagcacg
gccggcggctgcaggaactaccccgccactttctggataaacccgcagtttaagatccag
ctggaggaggtggacgacgagggggacgagggcggcgggcgcgagcccggctgcagcttc
ctgctggcgctgatgcagaagcaccggcgccgcgagcgccgctacggcaaggacatggag
accatcggatttgccgtctacgaggttcctcccgagcacgtggggaagtcgggcgtccac
ctgaagcgggatttcttcctggccaacgcctcgcgcgcccgctcggagcagttcatcaac
ctgcgagaggtgagcacccggttccggctgccgccgggggaatacatcgtggtgccctcc
accttcgagcccaacaaggaaggagacttcgtcctccgcgtcttctccgagaagaaagcc
ggcactgaggaaatggatgacaagatccaagccacgctcccggatgagaaagtgctctcc
gaaagccaaattgacgacaacttcaagcagctcttcaagcaactggcgggggcggacatg
gagatcagcgtcacggagcttcagaccatcctcaaccgcatcatcggcaaacataaagat
ctccggaccaaagggttcagcaccgagtcctgccgcagcatggtcaacctcatggacaaa
gatggcaacgggaagctggggctggtggagttcaacatcctgtggaacagaatccgcaac
tacctggccatcttccgcaagttcgacctggataagtcggggagcatgagcgcctacgag
atgcggatggcgctggaagcggcaggctataaattgaacaaaaagctgcacgagctgatc
atcacccgctacgcggagcccgacctggccatcgacttcgacaacttcgtctgctgcctc
gtgcgcctggagaccatgttccggtttttccaagcgatggacgtggaccaggatggcgtc
gtcaccttcgacttgctgcagtggctacagctcaccatgttcgcctga
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