Chroicocephalus ridibundus (black-headed gull): 134514861
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Entry
134514861 CDS
T10910
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
134514861 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crid04040
]
134514861 (CNGB1)
Ion channels [BR:
crid04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
134514861 (CNGB1)
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GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
134514861
NCBI-ProteinID:
XP_063189248
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Position
4:72495523..72525266
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AA seq
1301 aa
AA seq
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MLGWIERVVPQPPVPHLTEEIPPAPVRDPEPAKAPTRKAGGPGDAAAHARTEGKPPQRGT
RWLGQGTGVTLPAGPPPARHAGGLAEHVGSSVLSWLSQGLEKVIPQPVPAPGTLQALGKS
FEMSIDVPDQTEVQILKDEEVDALEITPFDPEEDELDGGGSETGSCGPEAGSDTMLEEWA
GARVLSWLVQGFERIVPQPETPKKPELELREQKGKAVAGGTKGTKTQAKSKSSVSAAQSL
PGAVEPVVAEEQPEPVATLIPPSLAGDGSRMFAWFVQGLEKVMPQPVTREKQDTQGVAAA
TSSPVEEIHIVPGEPEETDLVLEEINDDWINEATCEMMAWGREAKLVADAHPSSPHTGGA
SGRRKQTLWCWSGRAMSAMLHDALQKTAEAWSASAFPEQILALRPLLLSPCLTADEGVDE
VYFTEEALRFEQLEEAEISDLESAFVQVEEETAEAAETDAEGIIYSCAPSSMSERARDVE
LDRLVHDKPLDDGDASPPGRGALEQLPNVPSYRATAASRIPVLVASKPKAGVVNPNFCNE
EQFPLGNYPAVDIKDVDSGGDAVENDGTHLPVPTAGAPNMLAVPGAAPASPRRRLLAPEN
GLDEGLVSQSPTRALLGWDEEQRESLPERISSATSLSSAIINTRLQELVKLFKERTEKVK
EKLTDPDATSDDESPTTSPAKPAPAAAPVPPPAGEPEGDKPAEDEHYCEMLCCTFKYRPW
LDHLKNYRFPSSIDPLTNLMYVLWLFFVVMAWNWNCWLIPVRWAFPYQTPANIHCWLVVD
YLCDLIYLLDILVFQTRLQFVRGGDIITDKKAMTENYLRSQRFKMDVVCLLPLDFFYFKV
GVNPLLRFPRCLKYMAFFEFNNRLEAILSKAYIYRVIRTTAYLLYSLHVNSCLYYWASAY
EGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQLLNYFTGVFAFSVM
IGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPKTVQNRVKTWYEYTWHSQGMLDELE
LLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEI
GREMYIIQAGQVQVLGGPDSKTVLVTLKAGSVFGEISLLAAGGGNRRTANVVAHGFANLF
ILDKKDLNEILVHYPESQKLLRKKAKKMLKTSNKPKDEKGAPRDPLIIPPKADTPKLFQA
ALAATGRMGGKGPLAQLRWRLKELKAMQATQDSSFSPIPPKSPVHRRSPVTSHKARTHLG
EEIFSKSSDSLVTIRVIPTAQEDEEILAAEISEKEEEKEEK
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctggatcgagcgggtggttccccagcccccggtgcctcatctgacagaggag
atccccccggccccagtgcgggacccggagccggctaaggcaccgacacgaaaggctggt
ggccctggggatgctgctgcccacgcacgcaccgagggtaagccccctcagcgggggacg
cgctggctcgggcaggggaccggcgtcactttaccagctggtccccctcctgcccggcac
gccggggggctggcggagcacgtggggagcagtgtactctcctggctctcccaggggctg
gagaaggtgattccccagccggttccggccccaggaacactgcaggcgctcgggaagagc
ttcgagatgagcatcgacgttcccgatcagacggaggtccagatcctcaaggacgaggaa
gtggatgctttggagataaccccctttgatcccgaggaggacgagctggacggcggcggg
tcggagactggcagctgcgggccggaggctggctcagataccatgttggaggagtgggca
ggagcgcgggtgctcagctggctggtgcagggcttcgagaggattgtgccacagccggag
acgccgaaaaagccagagctggagctgagggagcagaagggcaaagctgtggcaggaggc
acaaaagggactaaaacccaggcaaagtcaaaaagcagcgtttcggctgcccagagcctc
ccaggagcagtggagccagtagtggctgaggagcagccggagccggtggccaccctcatc
cctccgtcgctggctggggacggcagcaggatgtttgcctggttcgttcagggcttggag
aaggtgatgccacagccggtgaccagggagaagcaggacacacagggagtggccgcagca
acctcgagtcccgtggaagaaattcatattgtccctggggaacccgaggagaccgacctt
gtcctggaagagatcaatgatgactggattaatgaagccacgtgcgagatgatggcctgg
ggtcgtgaggccaagctggtggcagatgctcatccctcttccccccatacaggaggagcc
tcaggaagaagaaaacagactctgtggtgttggagtggcagagccatgagtgcaatgctt
catgacgccctgcagaagacagctgaagcatggtctgcttcggctttccctgagcagatt
ttggccctaagacccctgctcctgtcgccttgtctcaccgctgatgagggtgtggatgaa
gtctacttcacagaggaggccctcaggtttgagcagctggaagaagctgagataagtgat
ctcgagagtgcttttgtacaggtggaagaggagacagctgaagctgctgaaactgatgct
gaaggtataatatatagctgcgcgcctagcagcatgtctgagcgtgcccgagacgttgag
ctagatcggctggtgcatgacaagccgctcgacgacggggatgcctcccctcctggccgc
ggtgcgctagagcagctccccaatgtccccagctaccgagccaccgctgcctcccgcatc
cccgtccttgtcgccagcaagccaaaggctggagttgtcaaccccaatttttgcaatgag
gagcaattccccctaggtaattaccccgccgtggacatcaaggacgtggacagcggaggc
gatgctgtggagaacgacggtacccacttaccggtgcccaccgctggcgctcccaacatg
ctggcggtgcccggcgcggctccggcatcccccaggaggaggctgctggccccggagaat
ggtctggacgagggactggtgagccagtccccaacccgagcgctgctgggctgggacgag
gagcagagggaaagcctgcccgagcgcatcagttcagccacgagcctgagcagtgccatc
atcaacacccggctccaggagctggtgaagctctttaaagagaggaccgagaaggtgaag
gagaagctgactgaccctgatgccacctcggacgacgagagccctacgacgtcccctgcc
aagccggcgcctgcggcagcaccagtgccccccccggcaggggagccggagggggacaag
ccggcggaggatgagcactactgcgagatgctgtgctgcacgttcaagtaccggccctgg
ctggaccatctgaaaaactaccggttccccagcagcattgacccgctcaccaacttgatg
tacgtgctgtggctgttcttcgttgtcatggcctggaactggaactgctggttgatccct
gtccgctgggctttcccctaccagacgccagcaaacatccactgctggctggttgtggac
tacctctgtgacctcatctatctgctggacatcctcgtctttcagacccggctgcagttt
gtccgggggggagacataataactgataaaaaggccatgacagagaactacctgagatca
cagcgctttaagatggacgtggtgtgcctcctgcccctggatttcttctacttcaaagtt
ggcgtcaacccgctcctgcgctttcctcgctgtctgaagtacatggccttcttcgagttc
aacaaccgcctggaggctatcctgagcaaggcgtacatctacagagtgattcggaccacc
gcctatttactgtacagcttgcatgtgaactcctgcctctactactgggcatcagcctat
gaaggactgggctctaccacctgggtctacgatggtgaaggaaacagctacatccgctgc
tactactgggcagtcaaaaccctcatcaccatcgggggcctgccggaccccaagacgctg
ttcgagatcgtcttccagctgctgaattacttcacgggcgtcttcgctttctccgtcatg
atagggcagatgagagatgtggtcggcgccgccaccgcagggcaaacttactatcggagc
tgcatggacagcaccattaaatacatgaacttctacaaaatccccaaaactgttcagaac
cgggtgaaaacgtggtacgagtacacgtggcattcacaaggcatgctcgacgagttggag
ctgctggtgcagctgccagacaagatgaggctggatatcgccatcgacgtcaactacaac
atcgtgagcaaagtggccctcttccagggctgcgacaggcagatgattttcgacatgttg
aagcggctcagatcggtggtctacctgcctaatgactacgtgtgtaagaagggagaaatt
ggccgcgagatgtacattatccaggcgggacaagtgcaggtgctggggggacccgatagc
aaaaccgtgctggtgactctgaaagccggatctgtgtttggagaaataagcttgctggca
gcgggagggggaaatcgccgaacggcaaacgtggtggctcacggcttcgccaacctcttc
attttggataagaaggacttgaacgagattttggtgcattatccggagtcccagaagctg
ctgcgtaagaaggccaagaaaatgctgaaaaccagcaataaacccaaggatgagaaagga
gcccccagagacccactgatcatccccccgaaagctgacaccccaaaactcttccaggct
gccctggctgccacggggaggatggggggcaaggggccgctggcccagctccggtggagg
ctgaaggagctgaaggcaatgcaggcgacgcaggattccagcttcagtccgatcccaccg
aaatcaccagtgcaccggagatcgcctgtcacctcccacaaagcacgtacccacctggga
gaagaaatattctcaaaatcttctgatagtttagtcaccattcgtgtgattcccacggca
caggaggatgaagaaattcttgctgctgagatttcggagaaagaagaagaaaaagaagag
aaataa
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