Chroicocephalus ridibundus (black-headed gull): 134515882
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Entry
134515882 CDS
T10910
Symbol
RAPGEF2
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04010
MAPK signaling pathway
crid04517
IgSF CAM signaling
crid04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134515882 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134515882 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134515882 (RAPGEF2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
cNMP_binding
PDZ
PDZ_6
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
134515882
NCBI-ProteinID:
XP_063191461
LinkDB
All DBs
Position
5:37944298..38139626
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AA seq
1652 aa
AA seq
DB search
MASYVDNSFRQAVMKNPAERSPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVDPYPVGKPPLPRGYHTECTKP
QLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGDMDLSGLP
ETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPDGRTEILCMGNSF
GVSPTMEKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTAERLTMHLVEEHSVVDPTFIEDFLLTYRTFLSSPMEVGKKLLEW
FNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLNIACAA
KAKRRLITLTKPSREAPLPFILLGGSEKGFGIFVDSVDFGSKATEAGLKRGDQILEVNGQ
NFENIQLSKAMEILRNNTHLSITVKTNLFVFKELLTRLSEEKRNGAPHLPKIGDIKKASR
YSIPDLAVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIGIGQSQ
DDSIVGLRQTKHIPPALPVSGTLSSSNPDLLQSHHRILDFNTTPDLPDQVLRVFKADQQS
RYIMISKDTTAKEVVIQAIREFALTATPDAYSLCEVSVTPEGVIKQRRLPDQLSKLADRI
QLSGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFRNIEPT
EYIDDLFKLKSKTGCTNLKKFEEVINQETFWVASEILRETNQLKRMKIIKHFIKIALHCR
ECKNFNSMFAIISGLNLAPVARLRTTWEKLPSKYEKLFQDLQDLFDPSRNMAKYRNVLNS
QNLQPPIIPLFPVIKKDLTFLHEGNDSKVEGLVNFEKLRMIAKEIRHVGRMASVNMDPAL
MFRTRKKKWRSLGSLSQGSTNAAVLDVAQAGGHKKRVRRSSFLNAKKLYEDAQMARKVKQ
YLSNLDLEMDEESLQTLSLQCEPATNTLPKNTGDKRSGKSETSPVAPRAGIQQKVQQQQQ
HKVNQALQVPAVSLYPSRKKVPVKDLPPFGINSPQALKKILSLSEEGSLDRHKKQSEDAV
SSASSQLSSPPTSPQSSPRKGYTLAPSGTVDNFSDSGHSEISSRSSIVSNSSFDSMPVSL
HDERRQRHSVSIVETNLGVGRIDRRIMIEPDQYSLGSYAPLSETRGLYAGATVLSSPSTE
ELSQDQGDRASLDAADSGRGSWTSCSSGSHDNIQTIQHQRSWETLPFGHAHFDSSGDGAG
LWASGSHMDPLMFPDHGTKYGRQSQGREGLDQAQSRASWASSTGYWGEDSEGDTGTIKRR
GGKDVSIEAETSSITSVPAEESKPAPVPTHIAVSPSSTKGLIARKEGRYREPPPTPPGYV
GIPIAEFAEGGSHPTRKPPDYNIAVQRSRMVARTCETHGTSTPQQQSHGHSTSRPVNKPQ
WHKPNESDPRLAHYPSQGFSTEEDEDEQVSAV
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataacagcttccgccaggcggtgatgaagaacccggcggagagg
agcccccaggatttggagattgtgtattcctatttacatggaatggaagccttgtctaac
ctgagagagcatcagctaagactgatgtgtgaaacagttagatatgaaaggcatgaagca
aatgaagttctgtactaccctgatgatattggtacctgttggtatatcctgctgtctggc
tcagtcttcattaaagaatctatgtttcttccaaggagcagttttggcaagcgttccgca
ggaagcttcaggcgtggctgtgaatgcattgttttagagccatccgaaatgattgtggtt
gattacatggatgaaaatgaagagtattttcagcgtcaagcttctcataggcaatctcga
agaagatttaggaaaatcaaccaaaaaggggagcgacaaacaattattgatactgttgac
ccttatcccgtggggaagccacctctacctagaggctaccatacggaatgcactaaacct
cagcttcctgcagatttcacaaagctgcaccttactgacagtctccacccacaggtgacc
cacgtttcatctagtcactcaggatgtagcatcactagtgactcaggaagcagcagcctt
tctgatatctaccaggctacagaaagtgaggctggtgatatggatctcagtgggttgcca
gagacagcagtggattctgaggatgatgatgatgaagaagacattgaaagggcatcggat
cctttaatgagtagggatattgttagagactgcttggagaaagacccaatagacaggaca
gatgatgacattgaacaactactggaattcatgcaccaattgcctgcttttgccaacatg
acaatgtcagtgaggagagagctctgtgctgtaatggtgtttgcagttgtggagagagca
ggaactattgtactaaacgatggggaagagctggattcctggtcagtcattttgaatggg
tctgtggaggtgacgtaccctgatggaagaacagagatactctgcatggggaacagtttt
ggtgtttcccctaccatggaaaaagaatacatgaaaggagtgatgagaaccaaagtggat
gactgccagtttgtttgtatagcccagcaagattattgccgcatcctcaatcaagtggaa
aagaacatgcagaaggtagaagaggaaggggagattgtgatggtgaaggagcacagggag
cttgatcgcaccggaacaagaaaaggtcacattgtcatcaagggaacagctgaaaggtta
acaatgcatttggtggaagaacattctgtggtagacccaacatttatagaagacttcctg
ttgacgtatcggacctttctttccagcccaatggaagtgggcaagaagttgttggagtgg
ttcaatgaccccagcctcagggataaggttacacgggtagtattgttgtgggtgaacaat
cacttcaatgattttgaaggagatcctgctatgactcgatttctggaagaatttgagaac
aatttggagagggagaaaatgggtggacatttgaggctgttaaatattgcttgtgctgct
aaagctaaacgaagattgataaccttgacaaagccatctcgagaagcccctttgcctttt
atcttgctgggaggatcagaaaagggatttggaatctttgttgacagtgtcgattttggt
agcaaagctacagaagcaggcttgaaacgtggagaccagattctggaagtgaacggtcaa
aactttgaaaacattcagctgtcaaaagccatggaaatccttagaaataacactcatctg
tctatcactgtgaaaaccaatttatttgtttttaaagaactcttaacacggttgtcagag
gaaaaaagaaatggtgctccccacctgcctaaaattggtgatattaaaaaggcaagtcgt
tattccatcccagaccttgccgttgatgtggagcaggtgataggattagaaaaagtaaat
aagaaaagtaaagccaacacagttgggggaagaaataaattaaagaagatacttgacaag
actcgaatcagtattctgcctcagaaaccatacaatgacattggaattggccagtctcag
gatgacagcattgtgggactgaggcaaacgaagcacattcctcctgctttacctgtcagt
ggaaccctgtcatccagtaatcctgacctactacagtctcatcaccgcattttagacttc
aatactactccagacttaccagatcaagttctgagggttttcaaggcagaccagcaaagt
cgctacatcatgatcagtaaggacacaacagcgaaagaagtggtcatccaggctatcagg
gagttcgctctcaccgcaacccctgatgcgtattcactgtgtgaagtctctgtcacgcct
gagggtgtcatcaagcaaaggaggcttcctgatcagttatccaagcttgctgacaggata
cagctgagtggcaggtattacctgaagaacaacatggaaacagaaactctttgttcagat
gaagatgctcaagagttactaagggaaagtcaaatttccctactacagctcagtactgtt
gaggtggctactcaactctccatgagaaactttgagctattccgtaatattgaacccacg
gaatacatagatgacttgtttaaactcaaatcaaaaacaggttgcactaatctaaaaaag
tttgaagaggtgataaatcaagaaacgttctgggtggcttctgagatcctaagagaaacc
aaccagttgaaaaggatgaagatcattaagcatttcattaagatagcactacactgcaga
gaatgcaagaacttcaactcgatgtttgccatcattagtggcctgaatttggcaccagtt
gcaaggctccgaactacttgggaaaagcttccaagcaagtatgaaaaactgtttcaagat
ctacaggatttgtttgatccatctaggaatatggcaaaatatcgtaatgtccttaacagc
caaaacctacagccccccattatccccctgtttcctgttatcaaaaaagaccttacgttc
cttcatgaaggaaatgactcaaaagtagagggcttggtcaattttgagaagctgagaatg
attgcgaaggagatacgccatgttggtcgcatggcgtctgtgaacatggatcctgcttta
atgtttagaacaaggaagaagaaatggaggagtttggggtctctcagccagggcagtacg
aatgcagccgtgctggatgtcgcgcaagccgggggtcataaaaagcgggtccgtcggagc
tccttccttaatgctaaaaaactgtatgaagatgctcagatggcacggaaagtaaagcag
tatctctcaaacctggatctggaaatggacgaagagagcctccagacgctgtctctgcag
tgtgagccagccaccaacacactgccaaagaatacgggagacaagcgatctggaaaatct
gaaacgtcaccggtggctccccgggcaggcatccagcagaaggtgcagcagcagcagcaa
cataaagtaaaccaggcattgcaggtccctgccgtatctctttatccctctcgcaagaaa
gtgccagtcaaagacctcccaccattcggcattaattccccgcaagctttaaagaaaatt
ctttcattatctgaagaaggaagtttggatcgtcacaagaaacaatctgaagacgcggtc
tcaagcgcatcttcacagctgtcttctcctcccacttcaccacagagctctccaaggaaa
ggctatactttggctcctagtggcacggtggataacttttcagattctggtcacagcgaa
atttcttccagatctagtattgtcagcaattcctcttttgactctatgccagtctccctg
catgatgagaggagacagaggcattctgtcagcatcgtggagacaaacctcggtgtggga
aggattgatagaagaatcatgattgaaccagatcaatacagcttaggctcatatgccccg
ctgtcagagaccagaggcctgtacgctggagcaacggtgctttcttctcctagtacagaa
gaactgtcacaggaccagggggacagagcttcactcgatgcagctgacagtggccgtggt
agctggacttcttgttcaagtggttctcacgacaacatacaaacaatacaacaccagaga
agctgggagactcttccttttggacatgctcatttcgatagttcaggcgatggggcagga
ctgtgggcctcgggcagccatatggacccgctgatgttccccgatcatggcacaaagtat
ggcaggcaaagtcaaggtagggagggccttgatcaagcacagtccagagcaagctgggca
tcctcaacaggatactggggagaggactcggaaggcgatacaggtaccataaagcggagg
ggtgggaaggatgtttcgattgaagctgaaaccagtagcataacatctgtaccagcagag
gagtcgaagccagctcccgtgcccactcacatagcagtatcaccaagtagtaccaagggg
cttattgcacgaaaagagggtcgatatcgggaaccacccccaactcctcctggttatgta
ggaatacctattgctgagtttgcagaaggtggctcccatccaaccagaaagcctccagat
tacaacatagcagttcagaggtctagaatggtggcacggacatgtgagactcatgggacg
tcaactccgcagcagcagtcgcatggccattcaactagcaggcctgtgaacaaaccccag
tggcataaaccaaatgagtcagatccacgtcttgctcactatccgtctcaagggttttcc
acagaggaagatgaagatgaacaagtctctgcggtctaa
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