Chroicocephalus ridibundus (black-headed gull): 134518170
Help
Entry
134518170 CDS
T10910
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crid04040
]
134518170
Ion channels [BR:
crid04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
134518170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Motif
Other DBs
NCBI-GeneID:
134518170
NCBI-ProteinID:
XP_063196605
LinkDB
All DBs
Position
7:complement(20813673..20893253)
Genome browser
AA seq
2011 aa
AA seq
DB search
MAQALLVPPGPESFRHFTRDSLAAIEKRSAEEKAKKPKQEHTDDDDENGPKPNSDLEAGK
TLPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPIRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEGFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINVISYFNSTM
DENGTFVNMTVSTFNWKDYIEDETHFYILEGQRDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQATAAVAAASVASRDFSGIG
GLGELLESSSEASKLSSKSAKERRNRRKKRRQKEMSEAENRGDIDKFPKSESEDSIRRKS
FRFSTEGSQLTYEKRFTSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDIGSENDFADD
EHSTLEDNESRRDSLFVPNRHGERRNSNISQASVSSRMVPALPVNGKMHSTVDCNGVVSL
VGGPSTLTSPTGQLIPEGTTTETEIRKRRLSSYQISMEMLEDSAARQRAMSIASILTNTM
EELEESRQKCPPCWYRFANTFLIWDCWSPWLKVKHVVNLVVMDPFVDLAITICIVLNTLF
MAMEHYPMTEQFSSVLSVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDGIIVSLSL
MELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKISSDCVLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVARIQKGID
YVKKKIREFIQKAFVRKQKALEEIKALEELNNKKDSCISNHTAVEISKDLNYLKDGNGTT
SGVGTGSSVEKYVIDENDYMSFINNPGLTVTVPIAVGESDFENLNTEEFSSESDMEESKQ
KINASSSSEGSTVDIAPPGEGEQAEIESEEALEPEACFTEGCVQKFPCCQVSIEDGKGKI
WWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIF
ILEMLLKWVAYGFQIYFTNAWCWLDFLIVDVSLVSLIANALGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGE
MFDVSDVNNYTQCEELIKNNQSARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVEDQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPVNKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETD
DQSKEMETILSRINLVFIILFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAE
MIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDP
HKDHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDPDATQFIEYSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIH
CLDILFAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQ
RAYRRYLLMQKVKKVSSIYNKNKNKEGDGPVIKEIIIDKLNGNSTPEKTDESSSTTSPPS
YDSVTKPDKEKYEKDKAEKNYKGKDVRENKK
NT seq
6036 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggcactgctggtaccaccaggacctgaaagcttccgccattttactagagat
tctctcgcagctattgaaaagcgttctgcagaagaaaaagctaaaaagcccaagcaagaa
catacagatgatgatgacgaaaatggtccaaaaccaaacagtgacttggaggcaggaaag
acactgccatttatttacggtgacatacctccaggaatggtatctgaacctttggaagac
ctggacccatattatatcaataaaaaaactttcatagtattgaataagggaaaggcaatt
ttccgattcagtgccacatctgccttgtacattttaactccttttaatcccatcagaaaa
attgctatcaagattttggtacattcattattcagcatgcttatcatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtagagtac
actttcactggaatttatacctttgaatcacttatcaaaattcttgcaaggggattctgt
ttagaaggttttacttttctgcgtgacccatggaactggcttgacttcagtgtcatttta
atggcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcctaaagactattgtgggagcc
ctaattcagtccgtgaagaagctctcggatgttatgatcctgaccgtgttttgtctgagt
gtatttgcactaatagggctgcagctgttcatgggcaacttgaggaataaatgcctgcag
tggcctccagacaattcgacttttgaaataaatgttatatcctactttaatagcacaatg
gatgaaaatggtacatttgttaacatgacagtgagcacatttaactggaaggattacatt
gaggatgaaactcatttttacattttggaaggacaaagagatgccctactttgtggtaat
agctctgatgcagggcagtgtcccgagggatatatatgtgtgaaagctggtagaaacccc
aactatggttacacaagttttgacaccttcagttgggcttttttgtcactctttcggcta
atgactcaggacttctgggagaacctgtatcagctgacgctacgtgctgctgggaaaaca
tacatgatattttttgtcctggtgatttttctgggctctttctacctgatcaacttgatc
ttggctgtggttgccatggcctacgaagagcagaatcaagcaaccatggaagaagcagag
cagaaagaggcagaatttcagcagatgctggaacaactgaaaaaacaacaagaagaagct
caggcgacagcagcagtagcagcagcatcagttgcatcaagagatttcagtggtataggg
ggattaggagaactcttggaaagttcttcagaagcatcaaagttgagctcaaagagtgct
aaagaaagaagaaacagaaggaagaaaagaagacagaaagaaatgtctgaagcagagaac
agaggagatattgataagttccccaagtcagagtcagaagatagtatcagaaggaaaagt
ttccgcttctccacagaaggaagtcaactgacatatgaaaaaaggtttacatctcctcac
cagtctttgctaagtattcgtggttccctgttctcaccaaggcgcaacagcaaaacaagc
attttcagtttcagaggtcgcgcaaaggatataggatcagaaaatgactttgctgatgat
gagcacagcactcttgaagacaatgagagcagaagagattccctctttgttccaaatcga
cacggagaacggcgcaacagtaatattagtcaagcgagtgtgtcatctagaatggtacca
gcccttccagtaaatgggaagatgcacagcactgtggattgcaatggagttgtctccttg
gttggaggaccttcaactctaacttcacctactggtcagcttataccagagggcaccact
acagaaacagaaataagaaaaagaagactgagttcttatcaaatttccatggaaatgctg
gaagattctgctgcaagacagagagcaatgagtatagccagcatacttacaaacacaatg
gaagagcttgaagaatccagacagaaatgcccaccatgctggtacagatttgcaaatact
ttcttgatctgggattgctggagcccatggttaaaagtaaaacacgtcgtcaatttagtt
gtgatggatccatttgttgatcttgctataactatttgcattgttttaaacaccttattt
atggccatggaacattacccaatgacagaacagtttagcagtgtcctttctgtggggaac
ctggtattcactgggatattcacagcagaaatggtactaaagataattgccatggaccct
tattattatttccaagaaggctggaatatttttgatggcattattgttagccttagttta
atggagcttggtcttgcaaatgttgaaggattatctgttcttcggtcattcagattgctt
cgagtttttaagttagcaaaatcttggccaactctaaatatgctgattaagattattggc
aactcagtgggggctttggggaacctgaccctggtgctggccatcattgtcttcattttc
gctgtggttgggatgcagctgtttgggaaaagctacaaggaatgtgtctgcaagatctcc
agtgattgtgtgcttccacgctggcacatgcatgactttttccactctttcttgattgta
tttcgagtgctgtgtggagaatggatagaaacgatgtgggactgcatggaggttgcaggc
caaaccatgtgccttattgttttcatgctggtcatggtgattggaaacctagtggtattg
aacctgtttctggccttgctgttgagctcatttagttcagacaaccttgctgctactgat
gatgataatgaaatgaacaatctccagattgctgtggcaaggattcagaaaggcatagat
tatgttaaaaaaaagatacgggagttcatccaaaaagccttcgttagaaagcagaaagct
ttagaagaaatcaaagcacttgaagagctaaacaacaagaaagacagctgcatttccaat
catactgctgttgaaataagcaaagatctgaattatcttaaagacgggaatggaaccacc
agtggtgtaggcacaggcagcagtgtggaaaaatacgtaatcgatgaaaacgattacatg
tcattcataaacaacccaggcctcactgtgacagtgccaattgcagttggagaatcagat
tttgaaaatttaaatacagaagaatttagcagcgaatctgatatggaagaaagcaaacag
aaaataaatgcatccagttcatcagaaggcagcacagttgacattgcccctcctggagag
ggcgagcaagcagaaattgaaagtgaagaagctcttgaaccagaagcctgttttacagaa
ggttgtgtgcagaaatttccatgttgtcaagtaagtatagaggatggcaaaggaaaaata
tggtggaatcttagaaaaacctgctacagcatagttgagcacaactggtttgagactttc
attgtcttcatgattctcctcagcagtggcgcactagcttttgaagatatatacattgaa
cagcgcaaaactatcaagaccatgctggaatatgccgacaaagtttttacatatattttc
attttggaaatgcttttaaaatgggtagcatatggttttcaaatatattttactaatgcc
tggtgctggctggacttcctgattgttgatgtctcattggttagtttaatagccaatgct
ttgggctattctgaacttggtgccattaaatcgcttcggacattaagagctttaagacct
ttaagagccttgtcacgatttgaaggaatgagggtggttgtaaatgcccttgtaggagca
attccatctatcatgaatgtattgctggtttgtcttatattctggctcatcttcagcatc
atgggagtaaatctgtttgctggcaaattctatcactgtgtcaacaccacaactggtgag
atgtttgatgtcagtgatgtcaacaattatactcagtgtgaggaacttataaaaaacaat
caaagtgcccgatggaaaaatgtgaaagtaaactttgataacgtaggagctggatatctt
gctctgcttcaagtagctactttcaaaggatggatggatattatgtatgctgctgttgat
tcacgagatgtagaagatcaacctaagtatgaggacaacttgtatatgtatctttatttt
gtcatctttatcatatttggatcgttctttaccttgaaccttttcattggcgtcattata
gacaacttcaaccaacaaaaaaagaagtttggaggtcaggatatatttatgacagaagaa
cagaagaaatattacaatgcaatgaaaaaactgggatccaaaaagccacagaaacctata
ccgaggccagtgaacaaattccaaggcatggtctttgattttgttaccaaacaagtattt
gacatcagcatcatgatactcatctgccttaacatggtcacaatgatggtagaaacagat
gaccagagtaaagaaatggaaacaattttatcccggattaaccttgtgttcattatcctt
ttcactggagaatgtgtcctgaaattgatttcacttcgccattactacttcactataggc
tggaatatttttgattttgtggttgtgattctctccatagtaggtatgttcttagctgag
atgattgagaaatattttgtgtcccccacactattcagagtgatccgacttgccagaatc
ggtcgaatcctgcgtctcattaaaggcgctaagggaatccgcactctgctttttgctttg
atgatgtctcttcctgctttgttcaacattggtctgctgctgttcctggtcatgtttatc
tatgcgatatttggcatgtccaactttgcctatgttaagagggaagttggcatcgatgac
atgttcaactttgaaacgtttggcaacagcatgatctgcctctttcaaattaccacatct
gctggctgggatggtttgctcgccccaattctgaacagtggggagccagactgtgacccc
cataaagatcatccggggagctctgtgaaaggcgactgtggcaacccttctgttgggatc
ttcttctttgtcagctacattatcatctcatttctggtagtggtgaacatgtacattgct
gtgatcttggagaacttcagtgttgctactgaagaaagcgctgaacccttgagcgaggat
gactttgagatgttctatgaggtctgggagaagtttgatcccgatgcaacacaattcata
gaatacagtaagctatcagattttgcagcttcgttagatcctcctcttcttatagcaaaa
ccaaacaaagtccagcttattgcaatggatctgcccatggtaagcggcgacagaattcac
tgccttgacatcttgtttgctttcacaaagcgtgttttgggggaaagtggggagatggat
gccctcagaatacagatggaagatcggtttatggcagccaatccttctaaagtctcctat
gaaccaattacaaccacattaaaacgaaaacaggaggaggtatctgctgtcattattcag
cgtgcttacaggcgttaccttttaatgcaaaaagttaaaaaggtgtcaagtatatataac
aaaaataaaaacaaagaaggagatggaccagttataaaagagataattattgataaacta
aatgggaactccactccagaaaaaacggatgagagttcctctacaacttccccaccttct
tatgacagtgtaacaaagccagacaaagaaaaatatgaaaaagataaagcagaaaagaac
tacaaaggtaaagatgtcagggaaaataaaaaataa
DBGET
integrated database retrieval system
