Chroicocephalus ridibundus (black-headed gull): 134522042
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Entry
134522042 CDS
T10910
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134522042 (CDX1)
Transcription factors [BR:
crid03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
134522042 (CDX1)
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GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
134522042
NCBI-ProteinID:
XP_063205358
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Position
11:18204855..18218281
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AA seq
259 aa
AA seq
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MYVGYLLDKDTNMYPSPVRHPSLNLNPQNYVPGPPQYSDFASYHHVPGINNDPHHGQPAA
AWGSPYTPAKEDWHSYGTTATPSTASPGQFGFSPPDFNPIQPPGSGLLPPPISSSVPQLS
PNAQRRTPYEWMRRSIPSTSSSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAE
LAAALGLTERQVKIWFQNRRAKERKVNKKKMQQQSQPTSTTTPTPPAIGTPGPIGGLCSS
SAPNLVSSSPLTVKEEFMP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtaggttatcttttggataaggacaccaacatgtatcccagccccgtccggcat
cccagcctcaacctcaacccccagaattacgtgccggggccgccccagtattcggacttc
gccagctaccaccatgtgccggggattaacaacgacccgcaccacgggcaaccggcggcc
gcctggggctcgccctacacccctgccaaggaggactggcattcctacgggaccactgct
acgccttccactgccagcccggggcagtttggattcagccccccagattttaaccccatc
cagcccccgggctctggactcctgcctccacccatcagcagctctgtcccccagctctcc
cctaatgcccagagacgcaccccctacgagtggatgaggcgcagcattcccagcaccagc
agcagcggcaagaccaggacgaaagacaagtaccgggtggtgtacacggaccaccagcgc
ctggagctggagaaggagtttcactacagccgctacatcaccatccgccgcaaggccgag
ctggccgctgccctcgggctcaccgaacggcaggtgaaaatctggtttcaaaatcggagg
gcgaaggagaggaaggtgaacaaaaagaagatgcagcagcaaagccagcccaccagcacc
accacgccgaccccgccggccatcggcacgccgggacccatcggaggcctctgcagcagc
agtgccccaaacctcgtctcctcgtctccactgactgtcaaggaggaattcatgccttaa
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