Citrobacter rodentium: ROD_04701
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Entry
ROD_04701 CDS
T01145
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cro
Citrobacter rodentium
Pathway
cro00900
Terpenoid backbone biosynthesis
cro01100
Metabolic pathways
cro01110
Biosynthesis of secondary metabolites
Module
cro_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
cro00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ROD_04701 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cro01006
]
ROD_04701 (ispA)
Enzymes [BR:
cro01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
ROD_04701 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
ROD_04701 (ispA)
Prenyltransferases [BR:
cro01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ROD_04701 (ispA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Arm-DNA-bind_3
Motif
Other DBs
NCBI-ProteinID:
CBG87249
UniProt:
D2TL08
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All DBs
Position
complement(523414..524313)
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AA seq
299 aa
AA seq
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MDFTRQLQVCVEQANQALSRFIAPLPFQNTPVVEAMQYGALLGGKRLRPFLVYATGKMFG
VSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL
AFTIISDAPMPEVTDRDRIAMISELANASGIAGMCGGQALDLDAEGRQVPLAALEKIHRH
KTGALIRAAVRLGALSAGEKGRNVLPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARNKARDLIEEARQSLQQLAAQSLDTSALEALADYIIQRDK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggattttacccggcaactacaggtctgcgttgagcaggcgaaccaggcgctgagtcgc
tttatcgccccgctaccctttcagaacactcccgtggtcgaagccatgcagtatggcgca
ttattaggcggtaagcgtctgcgcccgtttctggtctatgctaccggtaagatgtttggc
gtcagcctgagcaccctggatgcgccggccgctgccgttgaatgcatccacgcctattcg
ctgattcatgatgatttaccggcgatggacgatgacgatctgcgtcgcggtctgccgacc
tgccacgtaaaatttggcgaggcgaatgcgatcctcgcgggcgatgccctgcaaacgctg
gcgtttactattatcagcgatgcgccgatgccggaagtcaccgaccgcgaccgcattgcg
atgatttccgaactggcgaacgccagcgggatcgccgggatgtgcggcggccaggcgctc
gatcttgacgccgaaggcaggcaggtgccgctggcggcgctggaaaaaatccatcgtcat
aagaccggcgcgctgattcgcgccgcggtgcgtctgggtgcgttaagcgcgggcgaaaag
ggacgaaatgttctgccaatactcgataaatacgcagaaagtatcggtctggcgttccag
gttcaggatgacatcctggatgtggtaggcgatactgcaacgttgggtaaacgtcagggc
gccgatcagcagcttggcaaaagtacctatcctgcacttctgggtcttgagcaagcccgg
aacaaagcccgggatttaatcgaggaagccagacagtcgttacagcagctggccgcgcaa
tcactcgatacctcggcactggaagcgctagcggactacataatccagcgtgataaataa
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