Citrobacter rodentium: ROD_29871
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Entry
ROD_29871 CDS
T01145
Symbol
map
Name
(GenBank) T3SS effector protein Map
KO
K12787
LEE-encoded effector Map
Organism
cro
Citrobacter rodentium
Module
cro_M00542
EHEC/EPEC pathogenicity signature, T3SS and effectors
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IpaB_EvcA
LacI
ORF6C
Motif
Other DBs
NCBI-ProteinID:
CBG89719
UniProt:
D2TKE9
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All DBs
Position
complement(3161144..3161755)
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AA seq
203 aa
AA seq
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MFNPTAMVGRALAQAATQTLRPVVTKAATQAGMGASGMRFVPVQSNLMINHDKLTAQLLK
AVAKQTGNGDTQQWFRQEQITFISKTVNKTVDDYCINNNSTINKETKQHIFKAVESVIQQ
PLDINCAQSSISHFLQSNKYFNKIVDEQCGKGVDPITRFNTQTKMIDDVSCELFEKNFNS
TKVSDIKAITQSVIADCVQDTRL
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatccaacggcaatggtcggtagagcgttagctcaggcggctacacaaactctt
agaccagtggtaacaaaggctgcaacacaagcgggcatgggagccagcggtatgaggttc
gtacctgtgcagtcgaaccttatgattaatcatgacaaactgactgctcagctactaaag
gccgtggccaaacaaactggtaatggtgatactcagcaatggttccggcaggagcagatt
acttttatatccaaaacggtaaacaaaactgtggatgactattgcataaataataattcg
acaattaataaggagactaaacagcacatttttaaagcggttgaaagcgtgatacagcag
cctcttgatataaattgtgcacaatcatcaatcagtcactttttgcaatctaataaatat
tttaataagatagttgatgagcagtgcggtaaaggagtggatcctattacacgttttaac
actcagactaagatgatagacgatgtctcatgcgaactgtttgaaaagaattttaactcc
acgaaagtgagcgatatcaaagctataacgcagagtgtgattgcagattgtgtgcaggat
accaggctgtag
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