Crossiella sp. CA-258035: N8J89_17125
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Entry
N8J89_17125 CDS
T09057
Name
(GenBank) polysaccharide lyase family 1 protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cros
Crossiella sp. CA-258035
Pathway
cros00040
Pentose and glucuronate interconversions
cros01100
Metabolic pathways
cros02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cros00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
N8J89_17125
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N8J89_17125
Enzymes [BR:
cros01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
N8J89_17125
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
WHT22718
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Position
3728634..3729593
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AA seq
319 aa
AA seq
DB search
MSRTSSPSRRAPWSAALVVALAVTGLAAAAPAASAAPFDLAGWATQGGGTTGGGGATPVT
VSTAAAFTAAVKASGPAVVRITGTIALSGMAAVSSDKTIIGVGSGAAIIGHGLNISRSSN
VIVRNLNFRNWADDAINVQYSTRVWIDHNSFASGKDGAVDVKRASDLVTVSWNRFSSHDK
TMLLGHSDDNGGEDRGKLRVTYHHNSFEGTGQRHPRVRFGNPVHVYNNYYGGVTSYGVAS
TKEGGVLVEGNFFENTKDPFHLGEGSSPAGTLVARNNHFVSSGSGQTGGSVKSIPYSYQL
DRASDVKTIVRNGAGPGRI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggacatcctcaccgagccggcgggctccctggtctgccgcgctggtcgtcgcg
ctggccgtcaccggcctggcggccgccgcgcctgccgcctcagccgcgccgttcgacctg
gcgggctgggccacccagggcggcggcaccaccggcggtggcggcgccaccccggtcacc
gtcagcaccgcggccgccttcaccgccgcggtcaaggccagcggtcccgcggtggtccgc
atcaccggcaccatcgcgctctccggcatggccgcggtcagctcggacaagaccatcatc
ggggtcggctccggcgccgcgatcatcgggcacgggctcaacatctccaggtccagcaat
gtgatcgtgcgcaacctgaacttccggaactgggccgacgacgcgatcaacgtgcagtac
tccacccgggtgtggatcgaccacaacagcttcgccagcggcaaggacggcgcggtcgac
gtcaagcgcgcctccgacctggtcaccgtgtcctggaacaggttctccagccacgacaag
acgatgctgctcgggcacagcgacgacaacggcggcgaggaccggggcaagctccgggtg
acctaccaccacaactccttcgagggcaccggtcagcggcaccccagggtgcgcttcggc
aatccggtgcacgtctacaacaactactacggcggcgtcaccagttacggcgtggcgtcc
accaaggaaggtggcgtgctggtcgaaggcaatttcttcgagaacaccaaggacccgttc
cacctgggtgagggcagttctcccgcgggcacgctggtggcccggaacaaccattttgtc
agctccggctccgggcagaccggcggcagtgtgaagagcattccctattcctatcagctg
gaccgcgccagtgacgtgaagacgatcgtccggaacggggcaggcccagggcgcatctga
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