KEGG   Caenorhabditis remanei (nematode): GCK72_004956
Entry
GCK72_004956      CDS       T09085                                 
Name
(RefSeq) hypothetical protein
  KO
K12827  splicing factor 3A subunit 3
Organism
crq  Caenorhabditis remanei (nematode)
Pathway
crq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:crq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GCK72_004956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crq03041]
    GCK72_004956
Spliceosome [BR:crq03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    GCK72_004956
 Complex B
    GCK72_004956
 Complex C
   U2 SnRNP specific factors
    GCK72_004956
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd zf-met
Other DBs
NCBI-GeneID: 9821832
NCBI-ProteinID: XP_003116975
UniProt: E3LGG8 A0A6A5HCJ6
LinkDB
Position
II:6902578..6904223
AA seq 500 aa
MDSCLETIRNLHEERERLIDSTVKEKIAEKLTHKAKVNSEQRVKKFVDRYYEVSAELAKF
YKDEDGSKNMEMDAVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIINP
ERAEPDMVEFSDEEAYGRFLDLHAQYDKFINLKNVKRVDYMTYLLNFEKFTEIPKNTTKK
TGAYKEYVNVLKDYLVSFMQRTRPLHDLDAVFAEVDQTIQRAFESGNLPGWEADKSKSGP
QAAAVDLSPYNSAEELEGLGLERLKGALMALGLKCGGTLKERADRLFATKGHKLSDLEKA
AMASNNSDADKQKAKNLALAQAEGHIMALAEILSEERTGTRENVERKQARSAGEVEEEEE
EEPIIEEEEEIDESAPYNPKNLPLGWDGKPIPYWLYKLHGLNLSYSCEICGNQTYKGPKA
FQKHFNEWRHSHGMRCLGIPNTSHFANITKIKDALDLWNKLKTEKEMAKWNPDIDEEYED
SSGNVVTRKMYEDLKRQGLL
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggattcgtgtctagaaaccatccgaaacctgcacgaagagcgagaacggttaattgat
tcaacggttaaagagaagatcgctgagaagttgacacacaaagcgaaagtgaatagcgag
cagagagtgaagaagttcgtggatagatactatgaagtctccgcagagctcgctaaattc
tacaaagacgaggatggctctaaaaatatggaaatggatgctgtctccggaccaaacgag
ttcgccgagttctattctagactgaaagtcatcaaagatgcacacagaaggaatccagat
gagctcgcggaaccactaactgtggaattccagaaaatcaatgaagaaattataaatcca
gagcgtgcggaaccagatatggttgaatttagtgatgaagaggcgtacggacgtttcctt
gaccttcatgctcagtatgacaagttcattaatttgaagaatgtcaaacgagttgattat
atgacttatttgctcaatttcgaaaagtttaccgagattccaaagaacaccacaaagaaa
accggtgcttacaaggaatatgtcaacgttcttaaagattatcttgtgtcattcatgcaa
cgaactcgcccactacatgatttggatgcagtgttcgctgaagttgatcagacgattcag
agagcattcgaaagcggaaatttacctggatgggaagctgataagagcaaaagtggccca
caagctgctgcagtcgacttgtcaccgtataacagtgctgaagaattagaaggattgggg
ttggaaagattgaagggcgctctgatggctctcggtctgaagtgtggtggaactttgaaa
gagagagcagatcgtctcttcgctacaaaaggtcacaaactatcggatctcgagaaggcg
gcgatggcttcgaacaattcggatgccgataaacaaaaggctaagaatctcgcactcgca
caagcagaagggcacattatggctctcgctgaaattctatcggaggaacggacaggaact
cgtgaaaacgtggagcgaaagcaagcgagatcagctggagaagttgaggaagaagaagaa
gaagaaccaattatcgaagaagaagaggagattgacgagagcgctccatataatccgaag
aatcttccactcggttgggacggaaaaccgattccatattggttgtacaaacttcacggt
ttgaatttgtcgtactcgtgtgaaatatgcggaaatcaaacatacaagggaccgaaagcc
ttccagaagcatttcaatgaatggcgtcactcccatggaatgcgttgtcttggaattcct
aatacatctcattttgcgaatatcaccaaaatcaaggatgcacttgatttgtggaacaaa
ctgaaaaccgaaaaggagatggccaagtggaatcccgatatcgatgaggaatacgaagat
tccagtggaaatgtggtcacacgaaagatgtacgaagatttgaagcgacaaggtcttctg
taa

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