Caenorhabditis remanei (nematode): GCK72_010071
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Entry
GCK72_010071 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K06675
structural maintenance of chromosome 4
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crq03036
]
GCK72_010071
Chromosome and associated proteins [BR:
crq03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
GCK72_010071
Condensin II
GCK72_010071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
CC4_CEP85
ATG16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
9807346
NCBI-ProteinID:
XP_003106140
UniProt:
A0A6A5H4Y8
E3MCX0
LinkDB
All DBs
Position
III:complement(8621700..8627843)
Genome browser
AA seq
1553 aa
AA seq
DB search
MPPKKSTGPPPQSDESGSDFEEEPARKPQKKPSKSSKPSKFSKQEKEKELDPEEALKRAA
DTIFDGSEGEDDDSDLFALEIPPRPDFLVRPNKKDRLMILNVEVNNFKSYYGKASIGPFH
KSFTSIIGPNGSGKSNLIDSLLFVFGFRASKIRSAKVANLIHKSAGREPDSCTVTIHFQR
IVDVPGHYEVVKDSLFDISRTAYRNSSSSYAINGRPASKNEVEARLRLVDIDIEHNRFLI
LQGEVEQIAMMKPVKTTKSETGMVEYLEDIIGSNRLERFVKKFQRRVNRLNCDLSQQRIA
RDHARNSKIAMEGQVRTAIEFLNKENEAKTIEMKLNQRRKKKYKDRAAPKQAELDKQKEE
MKEIAAKLDENKSESKSAEDEEKKLSKDRLKIEKEIDQLTKEIDDLSAEETRRRETIKRY
ETDISKTEAEKDKEQKKRATFVSVPEKAEKKLAKWKEEVEQLIETEDTANAAADNNLEEF
EKRAEKLKEEQKKAQEAWSKSNTAFISARSEATVARNEYEDMNKMANSGSKKLDQLKERL
KTTEEKFIKEKEEIEKLRPEVDSWNEKLRNLKTSLPTVREEAKTTNLALNQCQERLDVLR
QQNSSGSGGSHLVKMLMKEKQEGRIPSFIGRLGDLGLIDKKYEGAICTNYGAILNNLITG
TSDDSKKIMNFLYKNKLPRTTIQSLDRVPQVRAEDMAPVPKDRYPGPRLFDLIECEPEVR
HIYYRTVRNAVVAESTTEALKMNKMSSCKNVNIVTLQGAMVQSSGSITGGGQTLKGFILT
DKNKKPKEVTAEDRRAEKELTVEVAQLQTKSDELREQEHKLDAQLIEARRKVHELEQRLS
IVTATVDSEGENIKSLRKAVENQEKEASKVKVDAKELEAKKKLAEEFEKKQDELSEEAEI
TRKRQAEVQSKLDGIFKELVQCHRDEAKDASTKRAKLEKDMAKETANVTNSGRNIAKCDE
NIVRMEKEIEKKKQMCIDLEEKAIDGEGLEGKKSALEEVEKKKTDVETQYKDIMKKQSEL
SDAETKLEEELRKCNEVIMELKEKMNADTMKVKEIQKKLDGLQVNRIPRFQFLTQSSRPE
DLAMQFDDELPVDENQSPEENEKQKKHMACVLSDRAYAMEFELRQKVLKNTESYEDVDGD
KMVQIQYLTDAEVDEISDRDAEELQFKLKTCEQQLETMKSKVDLSCIDAYVVKVNQFNEQ
VIKFAMVHEDHRKHNEKLQAIKKDRLEEFHSAFEFIGKHLVAVYKMLTDGGDAKLEYIDK
DDPFKEGISFMVRPAKKAWKQIQFLSGGEKTLSSLALIFALHMFRPTPFYVMDEIDAALD
YRNVSIIAQYVRQKTENAQFIIISLRNNMFELANRLVGIYKVDGCTQNVAIDPQKVCEMA
KGISDSLGQITCTLPEEITQQFSETMSRQSKEITAQEKQYPNFPSSSEISKAEKIVSVEG
RVRKQLNHTASDTTSGSRPQSKAATQANATERQTFNRPESRANQIKIPNPRLVERAASQT
SRTPRKERNTEADETTPPAKRSNSTTSKSPAKPVAGRSTKKKKSMSDDDEDSD
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaaaagtcaacgggtcctccgccccagtcggatgaatccggctcagacttt
gaagaagagcccgccagaaaaccccagaaaaagccatcaaagtcatcaaagccatcgaaa
ttctctaaacaagaaaaagaaaaggaattagatccagaagaagcgttaaagagagccgcc
gacacgattttcgacgggagcgaaggagaagatgacgattctgatctttttgcattggag
attccacccagaccagattttcttgttagaccaaataaaaaagatcgtctgatgattcta
aatgtggaagttaacaatttcaaaagctactacggcaaagcctccatcgggccatttcat
aaaagtttcacatccatcattggacccaacggttcaggaaaatcgaatcttatcgactca
cttttatttgttttcggttttcgagcctccaaaattcgttctgcaaaagtggccaactta
attcataaaagtgctggaagagagcccgattcgtgtactgtcactattcatttccagaga
attgtggacgtgcctgggcactacgaagttgtcaaggattcgttgtttgatatctctcgt
accgcctatagaaatagttccagttcatatgctatcaacggtagacctgcttcgaagaac
gaagtggaagcacgtctccgtctcgttgacatcgatattgagcacaataggtttttgatt
cttcagggagaggtggaacaaattgctatgatgaagccagtgaaaactactaaatcggag
acaggaatggtcgaatatttagaagacattatcggatcgaatcgtctggagcgctttgtc
aaaaaatttcagcgaagagtgaataggctcaattgtgacttgtcgcaacaaagaatcgct
cgtgatcacgcaaggaacagcaaaattgctatggaaggtcaagtcagaactgcgattgag
tttctgaataaagaaaatgaagctaagacgattgaaatgaagctcaatcagagaagaaag
aaaaaatataaggatcgagctgcaccaaaacaagctgagctcgataaacagaaagaagag
atgaaggagatagctgcgaagctggatgaaaacaaaagtgagagcaaaagtgcagaagac
gaagaaaagaagttgagtaaagaccgtttaaaaattgaaaaggaaatcgatcaattgact
aaagaaatcgatgatttgtcagctgaagaaacgcgcagaagggagacgatcaaacgatac
gagacagatatttcgaaaacggaagcagaaaaggataaagaacagaaaaaaagagcaact
tttgtttctgttcctgaaaaagcagaaaagaaacttgcaaaatggaaagaagaggtggaa
caattgatcgagactgaggatacagcaaatgcagcagcagataataatctcgaagagttc
gaaaaacgtgctgaaaagctaaaagaagaacagaagaaggctcaagaggcgtggtccaaa
agtaatactgcatttatcagtgctcgaagtgaggctactgtcgcacgtaatgaatatgag
gacatgaacaagatggcaaattctggatcaaaaaaacttgatcaactgaaagagcgtttg
aaaacgacagaagagaagttcattaaagaaaaagaagagattgagaaactaaggccggag
gtagactcatggaacgagaaactaagaaatctcaaaacaagcttgccaactgtccgggaa
gaggccaaaacaacgaacttagccctaaaccaatgtcaagaacgtctagatgtacttcgt
cagcagaattcatcgggctccggaggtagccatctcgtgaaaatgctgatgaaagaaaaa
caagagggtcgaattccgagcttcattggtcgtcttggtgatcttggtttgattgacaag
aaatatgagggtgctatttgtacaaattatggcgctattctcaacaatctaattactggg
acttccgatgactctaagaaaattatgaactttttgtacaagaacaaacttccacggact
acgattcaatcactcgatcgcgtaccacaagtcagagcagaagacatggcacctgttcca
aaagatcgttatcccgggcctcgtttattcgacctcatcgagtgtgagcctgaagtcagg
cacatttattataggacagttcgcaatgccgtcgttgctgaatcaacaactgaagcctta
aaaatgaacaaaatgagttcttgtaaaaatgtgaacatcgttacacttcaaggtgcgatg
gtacaaagttctggttccattaccggtggaggacagactttaaaaggatttattttgact
gataaaaacaaaaagcctaaagaagtcacagcggaagataggagagctgaaaaagaattg
acagtagaggtggcgcaactgcagacaaaatccgatgagttgcgagaacaagagcataag
cttgatgcacaattgattgaggctcgtcgtaaggtccacgaactcgaacaacggttgtcc
attgtgacggcaacagtagactccgaaggcgaaaacataaaatctctcagaaaggcagta
gagaatcaagagaaggaagcatccaaggtgaaagtagacgcaaaggaattggaggctaag
aaaaaactcgcagaggagttcgaaaaaaaacaagatgagctgagcgaagaagctgaaatt
actagaaagcgtcaagccgaagttcaaagtaagctcgatggaattttcaaagaactagtt
caatgtcatcgtgatgaggcaaaagacgcttcgaccaagcgtgctaagctcgagaaggac
atggcgaaggaaaccgcgaatgtgacgaattctggaagaaacatcgctaaatgtgatgaa
aacattgttaggatggaaaaggagattgaaaagaagaagcagatgtgtatcgacttggag
gaaaaagctatcgacggagaaggattagaggggaagaaatcggctcttgaagaggttgaa
aagaagaaaacagatgtggaaactcagtataaggatataatgaaaaagcaatcagaactg
tcagatgctgagaccaaattagaagaagagttgagaaaatgtaatgaagtaatcatggaa
ttgaaagagaaaatgaatgctgacactatgaaagtgaaggaaattcaaaaaaagttggat
ggtcttcaagtaaaccgtattccacgatttcaatttctcacgcaatcgagtcgccctgaa
gatctggccatgcaattcgatgatgagttgccggtcgatgagaatcaatctcctgaagag
aacgaaaagcaaaagaagcatatggcatgtgttctcagtgatcgtgcatatgctatggaa
tttgaactacgacaaaaagtgttaaaaaacaccgaatcgtatgaagatgtcgatggtgat
aagatggtacaaattcagtacttgacggatgcggaagtggatgagatttctgaccgtgat
gcggaagaactccaattcaaactgaaaacatgtgagcaacaactcgagacgatgaaatct
aaagtagatctctcgtgcatcgatgcttacgttgtgaaagttaaccaattcaatgaacaa
gtaatcaagtttgcaatggttcatgaagatcatagaaagcataatgaaaaacttcaagct
atcaagaaagatagactagaagaattccattctgctttcgagttcatcggaaaacattta
gtagctgtttacaagatgttaactgatggaggtgatgctaaattggagtatatcgataaa
gacgatccgttcaaagaaggaatcagtttcatggttcgccctgcgaaaaaggcttggaag
caaatccagtttttgtcaggaggcgaaaagactctatcttctcttgcactcatttttgct
cttcatatgtttagaccaactcctttctacgtaatggacgaaattgatgctgctctggat
taccgaaacgtgtcaatcatcgctcaatacgttcgacagaagaccgagaacgctcagttc
atcatcatttctctgcgaaacaacatgtttgaattggccaaccgtctagttggaatttat
aaagttgatggatgtactcaaaatgttgctatcgacccgcaaaaagtgtgtgaaatggct
aagggaatttcggatagtttagggcaaattacgtgcactcttcctgaagaaatcacccag
caattcagtgaaacaatgagtcgccaaagtaaagaaataaccgcacaagagaaacagtat
ccaaacttcccatcttcctcggaaatttcgaaggccgaaaagattgtcagtgttgaagga
cgtgtgaggaagcaattaaatcatacagccagtgacacaacttctgggtcgaggccacag
tcaaaagctgcaacacaagccaatgcaactgaaagacagacttttaatagacctgagtct
cgagcgaaccaaataaaaattccaaatcctcgacttgttgaacgagcagcttcgcaaaca
tcacgcacgccgagaaaagaaagaaacactgaagccgatgaaacgactccacccgccaaa
cgttccaactcgactacaagcaaatctccagcgaaacctgtagcgggtagatctacaaag
aaaaagaagtcaatgtcggacgacgatgaagattcggattga
DBGET
integrated database retrieval system