Caenorhabditis remanei (nematode): GCK72_010137
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Entry
GCK72_010137 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crq04040
]
GCK72_010137
Ion channels [BR:
crq04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
GCK72_010137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank
Ank_3
PKD_channel
Ank_4
YVC1_C
Ank_5
Motif
Other DBs
NCBI-GeneID:
9807512
NCBI-ProteinID:
XP_053587286
LinkDB
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Position
III:complement(8890425..8894440)
Genome browser
AA seq
1021 aa
AA seq
DB search
MLSAQGRRFSRCAPSPRPRNRNLQNMPPPAAVHIRTNDMISPEERRFLEAAELGNKPTLQ
EFLDYHDGERRLNVNCLDSMGRTALEIAVDNENMEVVELLLQQPDIRIGNALLCAIREGV
YRLVEVLVNHPNITKEMLGEGWTQALDPSEAASAEYSSDISPVILAAQLNQFEILQMLIR
KDAKIDPPHNHMCICETCDRERLYDSLQYSLKRINTYRALASPAYMSLTSSDPINEAFKL
SWDLQKLAFEEHEFKETYLQLSEQCKQYSCDLLSQCRSSEEVIAILNKDGNNKEENIDVW
ESKLSLSRLKLAIKYEQKAFVSHPHCQQLLTSIWYEGIPYRQQSGTWASFFLYAFLLIFW
PIFCLLYILMPRSRLGKLVRSPFMKFFYYSISFATFLGLLTWATFEDYRYEKGERGGVTR
ASDRGPPATWVESLVFTWVIGMLWSEIKQLWEEGFKRYMRQWWNWLDFLMICLYLCTISI
RLSAYYIFTYREDPYRYTVRTHWSSEEPMLVAEALFAVGNVFSFARIIYLFQTNPYLGPL
QISLGCMLVDVAKFCFIFVLIISSFSIGLAQLYWYYDPNTDVCLPGATCKQSSNVFSSIA
DSYLTLLWSLFSITKPEDTDVIENHKITQWVGQGMFIMYHCTSIIVLLNMLIAMMSHSFQ
IINDHADLEWKFHRTKLWMAHFDEGSSLPPPFNIIITPKSLVNFANFLLNSVRWLLGKYT
YQKNRNRATIRRPGYSRKRNEMEKSGGQDDETAKVPLTYADIIQRLVARFIHQTKKEMKM
DGVNEDDLHEIKQDISSLRYELRDDRRREIVRSSSHIDAVKRDIMRTMSTNSRARVYGGS
MRLPKTRPSVAEESEEDEKSDETSSTDEEADETRSRKSSVLYTPPVNSTLPGIISEEAPV
RKNQKRRASEADSKLPDRPLSETFQSNFTPKLLPVFAQPPHSALRKTDTSMSFPINGTIL
ETSVVKPPRGVLRASQENLTTVELMETLRKEMNEKFDRLINGMVEVKSPASHSHVEFNVE
K
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcggcacaaggacgtcgattctctcgttgtgctccatcaccacgaccaagaaac
agaaatcttcagaatatgccaccacctgcggcagttcatatcagaacaaatgatatgatt
agtcccgaggaaagaaggtttctggaggcagctgaactaggaaataaaccaacattacaa
gagtttttggactatcacgatggagaacgtcgattgaatgtgaactgccttgattcaatg
ggtcgaacagcactggaaatagcagttgataatgagaatatggaagttgttgaattactt
cttcaacagccagatattcgaattggaaatgcattgttgtgtgcaatacgagaaggtgtg
tatcgacttgttgaagtgctcgttaatcatcccaatatcacaaaagaaatgcttggagag
ggttggactcaggctctagatccatctgaagctgcgagtgcagagtattcaagtgatatt
tcaccggttatactggctgcacagctgaatcaatttgaaattttacaaatgttgattcga
aaagatgcgaagattgatccgccacacaaccacatgtgtatttgcgagacgtgtgatcgt
gaacgtctttatgattcacttcagtactctctgaaacggataaacacatatcgtgcactt
gcaagtcctgcgtatatgtccttaacaagttctgatccaatcaatgaagcattcaaactt
tcatgggatctacaaaaattggcgttcgaagaacacgagttcaaagaaacttacctgcaa
ttatcggaacaatgcaaacaatattcatgtgatcttttgagtcaatgtcgaagttcagaa
gaagttattgcaattctaaataaagatggaaacaataaagaagaaaatattgatgtttgg
gagagtaaactatcattgtcaagactgaaactggcaatcaaatatgaacaaaaagcgttt
gtctcgcatcctcattgccaacaacttctaacctcaatctggtatgaaggcatcccgtat
cgccaacaaagtggaacatgggctagcttctttctctacgcttttctactcatcttttgg
cctattttctgtcttttgtatattctgatgccaagaagtcgattgggtaaactggttcga
tctccattcatgaagttcttctactattccatctctttcgcaacatttctaggattacta
acatgggcaacatttgaagattatcgatatgaaaaaggagaaagaggcggagtaacgcga
gcttcggatcgtggaccgcctgcaacatgggtggaatcacttgttttcacatgggtcatc
ggaatgttgtggtcagaaatcaaacaattatgggaagaaggattcaagagatacatgaga
caatggtggaattggcttgattttcttatgatttgtctctatttatgtactatttcaatc
agactaagcgcgtattacatattcacatatcgtgaggatccatatcgatacacagttcgt
acacattggtcatcggaagaaccaatgttagtcgctgaagcactgtttgctgttggaaat
gttttttcctttgctcgaatcatttatctcttccaaacaaatccttatttgggacctctt
cagatttctcttggctgtatgctggttgatgttgccaaattctgtttcatatttgtcctg
atcatcagttctttctcgattggacttgctcaactctattggtattatgacccgaataca
gatgtatgtttacctggtgccacgtgtaaacagagttcaaatgtattctcctcgattgct
gattcatatttaacacttctctggtctctattctctattacaaagccagaagacacggat
gtaatcgaaaatcataagataacacaatgggttggacaaggaatgtttatcatgtatcat
tgtacatctataattgtactgctgaatatgctgattgccatgatgtcgcattcttttcaa
atcatcaacgatcatgccgatttggaatggaagtttcatcgaacaaaactgtggatggct
catttcgatgaaggatcgagtcttccacctccatttaatattattataactccaaaatca
ctcgtcaactttgcgaactttttgttgaattccgtgagatggttacttggaaaatatact
tatcagaagaacaggaatagagctactattcggcgtcccggatactctcggaaacgaaat
gaaatggaaaaatcaggagggcaagatgatgaaacagcaaaagttcctctgacttatgca
gatataattcagcgtctcgtggcaagattcattcatcaaacaaagaaagaaatgaaaatg
gatggagtcaatgaggatgatttacatgaaataaagcaggatatcagcagtttaagatat
gagcttcgagatgaccgtcggcgagaaatcgttcgtagttcatctcatattgacgcagtg
aaaagagacataatgcggacaatgagcacgaattcaagagctcgagtatacggtggaagt
atgagattaccaaagacacgtccgtcagttgcagaagaatcagaagaagatgagaagagt
gatgagacgagttcaaccgatgaagaggcagatgaaacgagatctcggaaatcatcagtt
ctttacacacctccagtcaattcaacgcttcccggtatcatcagtgaagaggctcctgtt
cgaaaaaatcaaaaaagaagagcaagtgaagctgattcgaaactgccagacagacctttg
tcggaaacatttcaatcgaattttactcctaaactacttcccgtgttcgctcagcctcca
cacagtgcacttcgtaaaacggatacttccatgagttttccgattaatggaacaattttg
gagacgtcggttgtcaaaccacctagaggtgttttaagagcatctcaagagaacttaact
acagttgagctgatggaaacgttgagaaaagaaatgaatgagaaattcgatcgattgata
aatggaatggttgaagtgaaaagtcctgcatctcatagtcatgttgaatttaacgttgaa
aaatga
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