Caenorhabditis remanei (nematode): GCK72_017947
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Entry
GCK72_017947 CDS
T09085
Name
(RefSeq) hypothetical protein
KO
K10297
F-box protein 11
Organism
crq
Caenorhabditis remanei (nematode)
Brite
KEGG Orthology (KO) [BR:
crq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crq04121
]
GCK72_017947
Ubiquitin system [BR:
crq04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
GCK72_017947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
NosD
F-box-like
zf-UBR
F-box
Motif
Other DBs
NCBI-GeneID:
9823972
NCBI-ProteinID:
XP_053581233
UniProt:
A0A6A5G9M9
LinkDB
All DBs
Position
V:complement(7487206..7491624)
Genome browser
AA seq
969 aa
AA seq
DB search
MTIRNTTPSNQRVTRRSTRSNVSSTCVASEASMSSSIRPEEMSSPSSPYYHLPTQVLDDS
SEQSPSYSQDSNSPPQHTFESLEPAGGSSISSIRYSPSGRNEGDNPTLGLYSAQATYPYS
LRKRRPCCTKDEDICFPITAATADETPQPTMKKFKLECLSPGAAREDFSIEDDETEVKPE
VKVENMELDEQDHINKLPDELLLKVFSLLTDQALLACCSVSYRFNKIANSNEIWKELYIS
LYDYRIPLFHPTHAKFEFRELNRWRDCNPWKESHRQLHHGVHVMIEPRHNYRATNYRCFD
QIEKALAFLEEDEYREKLIFLHAGVHEPIETILICTDVQIIGASDARDITSSVILEGSKN
TTLTFTDGSANAYFGFITVRFRADPSSRQPIQQPQIAQQPVPHFYCILVVDKEASPYIER
CDITSKTANGAAVCVKKYAAPRFKYCTVLDCENVGIYITDHATGHYEHCEIARNMLAGIW
VKNHANPYFRKCTIHSGKDVGVFTFEYGQGYFEKCNIHSNRISGIEVKNAANPVVIRCEV
HHGYTGGIYVHEKGRGQFMENRIYANAYAGIWITSHSDPTIRKNEIFTGQQGGVYIFGEG
RGLIEQNNIYGNALAGIQIRSQSDPIVRLNKIHDGLHGGIYVHEKGKGLIEENEVYGNTL
AGIWVTTGSCPILRKNRIHSGKQVGVYFYDQGHGLLEENDIFNHLYSGVQIRTGSNPKIT
RNKIWGGQNGGVLVYNGGKGCLEDNEIFDNAMAGVWIKTDSEPTLRRNKIYDGRDGGVCI
FNRGKGLLEDNEIFRNAQAGVLISTESNPILRRNRVFDGKSAGIEITNGATATLEENQLF
RNKYGGLCVATGVHPISKNNHIYDNHDTIARAIKSGQCLYKVSSNNSFPMHNFFRCTTCN
TTERNAICYNCIKHCHRGHTVELVRFDRFFCDCGAGTLERHCHLQNVPRDNDTVYDSATP
ISTETGTDL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgactattcggaatacgacgccttctaatcaacgtgtgacgcgtcgctcaactcgtagc
aacgtttcatcgacgtgcgtcgcttctgaagcatcgatgtcgtcgtcgattcgaccggag
gagatgtcgtccccatcgtcgccatactatcatctaccaactcaggtgttggatgattca
tctgagcagtcgcctagctattcacaggattcaaattcacctccacaacatacatttgag
tcattggagccggctggcggatcgtcaatatcatcaatccgatattcaccatctggaaga
aatgaaggcgacaatcccaccctcggattgtattctgcacaagctacttatccatattcc
ctccgaaaacgccggccttgttgcacaaaagatgaggatatatgctttccgatcacagct
gcaacagctgatgagacacctcaaccaacaatgaaaaagttcaagctagagtgtctttca
cctggagcagcgagggaagacttctctatcgaagatgacgagacagaagtgaaaccggaa
gtaaaagtggaaaatatggaactagatgaacaagatcacatcaataaacttcctgatgaa
cttcttctgaaagtattctcactactcactgaccaagcattgctggcgtgttgttctgtt
tcatatcgtttcaacaaaattgcaaatagcaatgaaatttggaaagagctctatatcagt
ttatacgactaccgtattccacttttccacccgacacatgctaaattcgaattccgggaa
ctgaatcgttggagggattgtaatccatggaaggagtcacatcgtcaactgcatcatgga
gtacacgtcatgatagagccacgtcacaactaccgagcaaccaattatcggtgtttcgat
cagattgagaaggctctggcgttcctggaggaagatgaatacagagagaaacttattttc
ttgcatgctggagtccacgagccaattgagaccattcttatctgcacagatgtacaaatt
atcggagcaagtgatgcaagagacatcacttcatcagttattctcgaaggaagtaaaaat
actacattgacatttactgatgggagtgcaaatgcctactttggattcattactgtccgg
tttcgtgctgatccatcaagccgtcaaccgattcaacaaccacaaatcgcacagcaaccg
gtaccacatttctattgcattctggtggttgataaggaagcgagtccatacattgaacga
tgtgatatcacttcgaaaactgccaatggtgctgccgtttgtgtgaagaagtatgctgct
ccaagattcaaatactgtacagtattggattgcgagaatgtcggaatctacatcactgat
cacgcaacaggacactatgaacactgtgaaattgctagaaacatgttggcaggaatctgg
gtgaagaatcatgcgaatccttacttcagaaaatgtacaattcattctggaaaagatgtt
ggtgtgttcacatttgaatatggccaggggtactttgaaaagtgcaatatccattccaat
cggatatcgggtatcgaggtgaaaaatgcggcgaatccggttgtgatccgttgtgaagtg
catcacggctatactggtggaatatatgttcatgagaagggacgtggccaattcatggag
aatcgaatctatgcgaatgcgtacgctggaatctggatcacgtcacattctgatccaact
atccggaagaatgagatattcactggacagcaaggaggtgtttatatattcggagaggga
cgtggactcatcgaacaaaataacatttatggaaatgcgttggctggaattcagatccgt
tctcaatccgatccaatcgtacgactgaataagattcacgatggtctccacggaggaatt
tatgttcatgagaaaggaaagggactgattgaggagaatgaggtgtatggaaacacgttg
gctggaatctgggtgaccactggatcatgtcctatcttgaggaaaaataggattcattct
ggaaaacaggtcggagtgtacttctacgatcaaggccatggtctcctagaagaaaatgat
atcttcaatcatctctattctggcgttcaaatccgcactggatccaacccaaagatcacc
cgaaacaagatttggggaggtcagaatggaggtgttttggtgtataatggaggaaaagga
tgcttagaagacaatgaaatcttcgacaatgcgatggccggtgtctggatcaagactgac
agtgagccaacactacgaagaaacaagatttatgatggaagagacggcggagtctgtatt
ttcaaccgtggaaaaggtcttctcgaggataatgaaatcttccgaaatgcccaagcaggt
gttctcatttcaactgaatccaatccgatcctccgaagaaatcgagtgttcgatgggaag
tcagcagggattgagatcacaaatggtgcaacggcaacactagaggaaaatcaattgttc
agaaataaatatggaggactttgcgtggcaactggagtccatcccatctcaaaaaacaat
cacatctacgacaaccatgatacaattgcacgagcgattaaatctggacaatgcctgtac
aaagtgagcagcaacaacagttttcctatgcacaacttctttagatgcacaacatgcaac
acaactgaacgaaacgcgatctgctataattgcatcaaacactgccatcgagggcatact
gtagaattagtgagatttgatagattcttctgtgattgtggtgcgggtaccctcgaacgt
cactgtcaccttcagaatgtgccacgggacaacgataccgtttatgactcagcgaccccg
atctcaaccgagactggcacagatttataa
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