Crassaminicella thermophila: FQB35_05865
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Entry
FQB35_05865 CDS
T06186
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
crs
Crassaminicella thermophila
Pathway
crs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FQB35_05865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crs03019
]
FQB35_05865
03009 Ribosome biogenesis [BR:
crs03009
]
FQB35_05865
Enzymes [BR:
crs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FQB35_05865
Messenger RNA biogenesis [BR:
crs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FQB35_05865
Ribosome biogenesis [BR:
crs03009
]
Prokaryotic type
rRNA helicases
FQB35_05865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
UvrD-helicase
AAA_30
HTH_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
QEK13601
UniProt:
A0A5C0SH01
LinkDB
All DBs
Position
1246545..1248128
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AA seq
527 aa
AA seq
DB search
MNNITFEELGLRKEIIRAIDDLGFEEPTPIQKSAIPYMLQKKDIIGQAQTGTGKTAAFGM
PIIHNIQADIKAPQALILTPTRELAIQVADEIRKFSKYIHGVKTLAIYGGQPIERQIKAL
KAGVQIITGTPGRLLDHIRRRTIRLNEINIVVLDEADQMLDMGFQEDIENILKEIPKERQ
TVLFSATIPKEIEALAKNYQKNPKKVKVVHEKLTVPLIEQYYFEVKAREKLEVLCRVLDM
EKEGLSVIFCRTKKGVDELVESLQSRGYFAEGIHGDLKQAQRDRVMKKFREGTIELLVAT
DVAARGIDVENVEMVINYDIPEDLEYYVHRIGRTGRAGKAGVAYTFVTGKQIRLLKSIEK
FTKTKIKRKKVPTINDLAERQRELFSNRIIKVIEEGHLGPYTSMIERLAEEYSSIDIAAA
LAKIIMEKNRVELEEVKDPFENTGATESGMARIFLNIGKRDRVKVGDILGAIVNKAKIEG
SSVGTIDMFDKFTFVEIPIDLAAKFTSNINKIRIKGKKIKAEPANSR
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatattacatttgaagaattaggattaagaaaagagattataagagctatagat
gatttagggtttgaggagccaacgccgatccaaaaatctgcaattccatatatgctacaa
aaaaaggatattattgggcaggctcaaacaggaactggtaaaacagctgcttttggaatg
ccaattattcataatatacaagcagatattaaggctcctcaagcattgattttaacacct
acgagggaattagctattcaagtagctgatgaaataagaaaattttcaaaatatatacac
ggcgtaaaaactttagctatttacggtggccagcctattgaacgtcagattaaagcattg
aaagcaggtgttcaaattataacaggtactccgggaagattattagatcatatacgtaga
agaaccataagattaaatgaaattaatatagttgttttagatgaagcagatcaaatgctg
gatatgggttttcaagaagatatagaaaatatactaaaagaaattcctaaagagagacaa
acggtgcttttttcagctacaattcctaaagaaatagaagcattagctaaaaactatcaa
aaaaatccaaagaaggtaaaagtagtccatgagaagcttacagtacctcttattgagcaa
tactattttgaagtaaaggctcgtgaaaagctagaagtattatgtagagtattagatatg
gaaaaagaagggttatcagtaatattttgcagaactaaaaaaggtgttgatgaacttgtt
gaaagtcttcaaagcagaggttattttgcagaaggaatacatggagatttaaaacaagcc
caaagagatcgagtaatgaaaaaatttagagaaggtacaatagaactacttgtagctact
gatgtagcggctagaggtattgatgtagaaaatgtagaaatggttattaattatgatatt
cctgaggatttagaatattatgtacatagaataggaagaacaggaagagcaggaaaagct
ggagtagcatatacttttgtgacaggaaaacagataagattattaaaaagcattgaaaaa
ttcacaaaaacgaaaataaaaagaaaaaaggtaccaactataaatgatttagcagaaagg
caaagagaacttttctctaatcgaattatcaaggtcattgaagaaggacatttaggccct
tatacttcaatgattgaacgtcttgcagaagaatatagttccattgatattgcagcagct
ttagcaaaaattattatggaaaagaatagagtagagctagaagaagtaaaagatcccttt
gagaatacaggtgctactgagtcaggcatggctagaatctttttaaacataggtaaaagg
gatagagtaaaggtgggagatatccttggtgctattgttaataaagcgaaaatagaaggt
agtagcgtagggactatcgatatgtttgataaatttacttttgttgagattccaatagac
cttgcagcaaaatttacaagtaatattaataagattagaattaaagggaaaaaaataaaa
gcagaacctgcaaatagtagatag
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