Castanea sativa (European chestnut): 142613422
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Entry
142613422 CDS
T11266
Name
(RefSeq) NPL4-like protein 2
KO
K14015
nuclear protein localization protein 4
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
142613422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csaa03009
]
142613422
Ribosome biogenesis [BR:
csaa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
142613422
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPL4
UN_NPL4
OTU1_UBXL
DWNN
JAB
ubiquitin
EF_HAND_1_PLCG
Motif
Other DBs
NCBI-GeneID:
142613422
NCBI-ProteinID:
XP_075641898
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All DBs
Position
10:complement(21761479..21765125)
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AA seq
412 aa
AA seq
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MIQLRVRSRDGLERVSIENPQITVSQLKTLIQSQLQIPIQNQTLSTNQNLLLSKTPADLL
NFTDMANPNATLSSLNLAHGSIVFLAYDGERNVSGPRNFNPAGSFGRKMTMDDLIAKQVR
VTRQENPHCELVSFDRDSAHAFQHYVNETLAFGVKRCGFMYGTVSETGKVEVDFIYEPPQ
QGTEENLAILRDPDEEKLVEAIGIGLGMRKVGFIFTQTISQDKKDYTMSNKEILQAAEFH
AESGLKEWVTAIVKLEVNEDGGADVHFEAFQMSDNCVKLFKDGLFETDIAEDDDPKLSKM
KKDVVVGVKDTREVDNDFFLVVVKIFDHQGPLSSTFPIENRITHVTLKALKNHLDRTKSL
SFVKRISDFHLLLLLARFLDLNADVPALAECVQRQTAVPEGYQLLIESLASS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgattcagctgagagtccgaagccgcgatgggttagagcgagtctccatcgaaaacccc
caaatcacagtctcgcaactcaaaaccctaatccaatcccaactccaaatcccaatccaa
aaccaaaccctctccaccaaccaaaacctcctcttatccaaaaccccagccgatcttctc
aatttcacggacatggccaaccccaacgccaccctctcgtccctcaacctcgcgcacggc
tccatcgtcttcctcgcctacgacggcgagcgcaacgtttccggccccaggaatttcaac
ccggccggctcgttcgggcggaagatgaccatggacgacctaatcgcgaagcaagtgagg
gtcacgcgccaggagaacccgcattgcgagctcgtgtcgtttgatcgcgattccgcgcac
gcgttccagcattacgtgaatgaaacgctggcgtttggcgtgaagcgatgtgggttcatg
tacggtaccgtttcggagaccggaaaagtcgaggtggacttcatctacgagcctccgcag
caagggactgaggagaatttggctatactccgagacccagatgaggaaaagcttgtggaa
gccattggtattggtttggggatgaggaaagttgggttcatcttcacacagacaatcagt
caggataagaaggattacaccatgtctaacaaggaaattcttcaggctgcggagtttcat
gctgagagtgggcttaaagagtgggtcactgcgattgtgaagcttgaggtgaatgaggat
ggtggtgctgacgtgcactttgaggcctttcagatgagtgacaattgtgtgaagttgttt
aaggatggcttgttcgagaccgatattgctgaagacgatgatcctaagctttccaaaatg
aagaaggatgtggttgttggggttaaggatactagggaggttgacaatgattttttcttg
gtcgtggttaagattttcgatcaccagggtccattgtcatcaacgtttcccattgagaat
cggattacccatgtgacacttaaggcgctgaaaaatcatctggacaggacgaagagtctg
tcttttgtgaagcgaatatccgattttcatttgctgcttttactggccagatttttagac
ctcaacgctgatgttcctgccctggcagagtgtgttcagagacagacagcagtaccagag
ggttaccagctcctaatcgagtccttggccagctcttga
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