KEGG   Castanea sativa (European chestnut): 142618294
Entry
142618294         CDS       T11266                                 
Name
(RefSeq) THO complex subunit 7A
  KO
K13176  THO complex subunit 7
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    142618294
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csaa03019]
    142618294
   03041 Spliceosome [BR:csaa03041]
    142618294
Messenger RNA biogenesis [BR:csaa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     142618294
Spliceosome [BR:csaa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    142618294
SSDB
Motif
Pfam: THOC7 Prominin APG6_N SPATA1_C
Other DBs
NCBI-GeneID: 142618294
NCBI-ProteinID: XP_075647318
LinkDB
Position
12:complement(20789317..20792860)
AA seq 240 aa
MLKGRKVSGRGEAVTANYAFSPLDDDIIIKHRLLTRTTTTRGEPPLKKLQKKFTSFFVEV
EKDTDNYGDCEKLAKAFLQEMSTFEIPLLKSKAVVDANVREKENFNELKDDINRQIVQAQ
ADIEDLKKLLEESKIERQHKEECEAIRKLIAAQPPRSETQKMITELEKEIAALDAENTAG
SRLLELRKKQFALLLHVVDELQNTIEEEQKSLVEEMRLATEELKNGIEDASGGSDAMAVD
NT seq 723 nt   +upstreamnt  +downstreamnt
atgctaaaaggaaggaaagtttctggtaggggagaagcggtaacagctaattatgctttt
agcccgcttgacgatgacattattataaaacacaggcttctcacccgtaccacgaccaca
aggggtgaacctccgttgaagaaacttcagaagaagttcacctcttttttcgttgaggtc
gagaaagatacggataattatggcgactgtgagaagcttgccaaagctttcttacaggag
atgtcgacgtttgaaattccactcctcaagagcaaagcagttgttgatgcgaacgtgaga
gagaaggagaacttcaacgagttgaaagatgacataaataggcagattgtgcaagcgcag
gctgacatagaagatcttaagaagctgcttgaagagagtaagattgagaggcagcacaaa
gaggagtgtgaggcaatcaggaaattgattgctgcgcagccaccaagatcagagacacag
aagatgataacggaattagagaaagagattgcagctttggatgcagagaacactgctggt
tcaaggttgctggagcttcgcaagaaacagtttgcccttttgttgcacgtggtggatgag
ttgcagaataccatagaggaagagcagaaaagtttggttgaggagatgagacttgcaact
gaagagctgaagaatggaattgaggatgctagtgggggctcagatgccatggctgttgat
tag

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