KEGG   Castanea sativa (European chestnut): 142619946
Entry
142619946         CDS       T11266                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142619946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csaa03041]
    142619946
Spliceosome [BR:csaa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    142619946
 Complex B
    142619946
 Complex C
   U2 SnRNP specific factors
    142619946
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N LLPH
Other DBs
NCBI-GeneID: 142619946
NCBI-ProteinID: XP_075649459
LinkDB
Position
12:complement(7757427..7767162)
AA seq 510 aa
MSSTLLEVTRSAHEEVERLERLIVKDLQNEPTSKKARLFQSHRVCNMIDTIISTTNKLVE
IYEDKDNARKDEIAALGGQTAAGTNVFSAFYDRLKEIREYHRRHPAARVVDANEEFEGLL
KEEPQIEFSGEEALGRYLDLHELFNQFINSKFGDPSTEYSTYLDVFSQPHKIPHKLKLTR
QYKEYMENLLEYLIYFFQRTEPLQDLDRIFSKIETEFEDQWANNAVEGWENMGQENGHVP
AQHTVIDLDYYSTVEELVEVGPEKLKEALAALGLKTGGTVQQHAERLFLTKNTPLEKLDK
KHFAKSSRVFQQNGTTAALQQDENSKEIALMEAKMQKLCDLLDETIGRTRDNIVKKQALT
YEEIEAEHEEEETQADTESDEDDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
GNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKDLWKKIQERQGVNKW
RPDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgttgctggaggtgactcggtcggctcacgaggaggtggagcgtttggag
aggctgatagtgaaggaccttcagaacgagcccacttccaaaaaggcccgcctctttcag
agccaccgcgtttgcaacatgatcgacaccattatctccaccaccaataaacttgttgag
atttatgaagataaagataatgctaggaaagatgagattgcagctcttggaggccaaacc
gcagcggggacaaatgtgtttagtgcattctatgatagattgaaagagattcgcgaatac
catagaaggcatccagctgcacgtgttgttgatgctaatgaggagttcgagggactgctt
aaagaggaaccacaaattgagttcagcggagaggaagctttggggcgatacctagacttg
catgaattatttaatcagttcattaattctaaatttggagacccttctaccgagtactct
acttacctagatgttttttcacaaccacataagattccccacaaactgaaattaacaagg
caatacaaggaatacatggagaatctattggagtatctaatatattttttccagcggaca
gagcccttgcaagatcttgatagaatattctcaaagatcgagactgaatttgaagaccaa
tgggcaaataatgcagtagaaggatgggagaacatgggtcaagaaaatggacatgttcct
gctcagcacactgtaattgatcttgattattacagcacagttgaagagttggtggaagtg
ggtcctgaaaagttaaaggaggcattggctgcattaggactaaagacgggtggcactgtt
cagcagcatgcagaaaggcttttccttacaaaaaacacaccacttgagaagttggacaag
aaacattttgccaaaagttcacgtgtttttcaacaaaatgggactactgcagctctgcaa
caagacgagaattcaaaagaaattgccctaatggaagccaaaatgcaaaaattgtgtgac
ttactggatgagacaattggacgaacaagagacaatattgtgaagaagcaggctttgaca
tatgaggaaatcgaagcagaacatgaggaggaggaaacacaagctgacactgaaagtgat
gaagacgaccagcaaatttacaatccccttaagttgccaatgggttgggatgggaagcct
ataccatattggctgtataagctgcatggtcttggtcaggaatttaagtgcgagatatgt
gggaactacagttactggggtcgtagggcttttgaacggcatttcaaggaatggcgccat
cagcatgggatgcgctgccttggtattccaaacaccaagaacttcaatgaaatcacatca
attgaggaagcaaaagacctttggaagaaaatacaagaacgtcaaggagtgaacaagtgg
cgcccagatcttgaagaagaatacgaagacaaagagggtaatatttacaataagaagaca
tataccgacttgcagcgccagggattgatttga

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