Castanea sativa (European chestnut): 142621091
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Entry
142621091 CDS
T11266
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
142621091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csaa03000
]
142621091
Transcription factors [BR:
csaa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
142621091
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
142621091
NCBI-ProteinID:
XP_075650520
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Position
12:complement(9155536..9159247)
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AA seq
341 aa
AA seq
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MGDSLSGFFDENEFGESNLGSDDLFSNDLFSIFESLKGVVEFPPVDEVVVGSGEETPRLV
SQKSASSCSALQESETELEISPKSRKRPKLMTSSEEANPEGQQKSSHITVERNRRKQMNE
HLSVLRSLMPCFYVKRGDQASIIGGVVDYINELQQILQSLEAKKQRKVYTEVLSPRLIPS
PSPRPSPLSPRKPPLSPRLNLPISPRTPQPTSPYKPRVQQGYLSPTMATSLEPSPSSSST
SSNINDNINELVANSKAPIADVEVKFSGPNLLLKTVSPPIPGQAVKIMSTLEDLSLEILH
VKISTVDETMLNFFTIKIGIECQLSAEELAHQIQQTFCNVH
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatagtttgtctggattttttgatgaaaatgagttcggagagagcaacttgggc
agcgatgatctttttagtaatgatctttttagtatctttgagagccttaagggtgtggtg
gagtttcctcctgttgatgaagttgtggttggatctggtgaagaaacgccgagactggtc
tctcagaaatccgcatcgtcctgcagtgctttgcaagagtcggagactgagcttgaaata
tcaccaaagagcagaaagagaccgaagcttatgacttcctcagaggaagcaaaccctgaa
gggcaacaaaagtcgtctcatatcactgtggaacgcaaccgaaggaagcaaatgaacgag
catttgtctgtgttgaggtcacttatgccttgcttttatgtcaaaagaggagatcaagca
tcaataattggaggggtggtggattacatcaatgagttgcagcaaattctacaatcgctg
gaggccaagaagcaacgaaaagtttacactgaagttctaagccctaggctaattccaagt
ccaagtccaaggccttcaccacttagccctagaaaacctcctctaagccctagactaaac
ttacccattagcccaagaaccccacagccaactagcccttacaagcctagggtgcaacaa
ggttacctctcccccacaatggctacttcgcttgagccatctccttcatcttcttccact
tcctccaatattaatgataatatcaatgagctcgtcgcgaattcaaaggctccaatcgca
gatgtggaggtgaagttttcaggtccaaaccttcttttgaagacagtgtctcctccaatt
cctggccaagctgtgaaaataatgtccaccctggaagacctctctcttgaaattctccac
gtaaagatcagtactgtcgacgaaaccatgctcaatttcttcaccattaagattggaatt
gaatgtcaacttagcgccgaggaacttgcacaccaaattcagcaaacattctgcaatgtc
cactaa
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