Castanea sativa (European chestnut): 142627862
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Entry
142627862 CDS
T11266
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142627862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142627862
Ubiquitin system [BR:
csaa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
142627862
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
142627862
NCBI-ProteinID:
XP_075657866
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All DBs
Position
3:18472595..18475413
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AA seq
458 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGCV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaaaactcttactggaaagaccataactctcgaggtcgagagctct
gatacaatcgataatgtcaaagcaaaaatacaggacaaggaaggaatcccaccagaccag
cagaggctgatctttgccggaaaacagttggaggatggtcgtactcttgctgattacaac
atccagaaagaatccaccctccatttggttcttcgtttgagaggtgggatgcagattttc
gtcaagacactcactgggaagaccattactcttgaagttgagagttccgataccatagat
aatgtgaaggcgaaaattcaggacaaagaaggcattcccccagatcagcagaggttgatt
tttgctggaaagcaacttgaggatggccgaactctggccgattataacattcagaaggag
tctacactccaccttgttctccgcctcaggggtggtatgcagatatttgttaaaactctt
acaggaaagacaatcactttggaagttgaaagctctgacacaattgacaatgtcaaagcg
aaaatacaagacaaggaaggtattcctccagatcagcagaggctgatctttgctggaaag
cagcttgaggatggtcgaacattggctgactacaacatacagaaagagtccaccttgcat
ttggtcctccgccttcgtggtggaatgcaaatctttgtaaagacccttaccggcaagact
attactctcgaggttgagagctctgatacaattgacaacgtcaaagcaaaaattcaggat
aaggaaggtattccaccagaccaacagaggctgatattcgccggaaaacagctggaggag
ggcaggactttggctgactataacatccagaaagagtctacacttcatttggttctcagg
cttcgtggagggatgcagatttttgtgaagactctgacaggaaagaccatcacccttgag
gtggagagttctgataccattgataatgttaaagcaaagattcaagacaaggaaggtatt
cctccagatcagcagaggctcatctttgcagggaagcaactcgaggatggccgcactctt
gctgattacaatattcagaaggaatcaactctccatctcgttctccgccttcgtggcggt
atgcagatttttgtaaaaactcttactgggaagacaatcacacttgaagtggagagctct
gataccattgacaatgtgaaggcaaagattcaggacaaggagggaatcccacctgatcag
cagaggctcatctttgcaggaaagcagctggaggatggtcgcacacttgcagactacaat
atccagaaggagagcactctgcatcttgttctccgcctccgtggtggttgtgtatag
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