Castanea sativa (European chestnut): 142629273
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Entry
142629273 CDS
T11266
Name
(RefSeq) uncharacterized protein LOC142629273
KO
K19022
AP-5 complex subunit beta-1
Organism
csaa Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142629273
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
142629273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
142629273
NCBI-ProteinID:
XP_075659339
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All DBs
Position
3:29806838..29814674
Genome browser
AA seq
1110 aa
AA seq
DB search
MSLKPLSPQDWESLIEDFQHGGSRRHKWSSTPSILDLALSSILKKDFPLKIQLIIFLEEF
SDSFLDFDEHFLERLVDTLKIIIQSPTDNLFITMSLKDQMLVSTTSIFISTIHQFNIIII
ESLVEFLLILINRPNHGPDRQTRGVACECLRELERSHPCLLSHIAGHLWSLCQNERTHVT
QSYMLLFTWVIHNIVVHNVNVSILNTSVPLVPFNVPQSLLLSDACSSTSNGTNNYNYKEL
RRAMAFLLESPQVLTACGMVEFMAVIIPIAVALELQASMLKVQFFGMVYSYDPMLCHVVL
KLYLSFFDAFDGQEGEIARRLMLISKEAQSFLVFRLLALHWLLGLNQSVLSSKGDKKKKK
PMAFDSMGLSFYPNVFDPLALKALKLDLLALCMESLKSKSDSEMGDSVEKVFEDGIVSVS
AYKWLPPRSTETAVAFRAFHKFLIGGSSHFDTDPSTTTTIMESTIFHSLQGMLLDMMLEC
QKLVPVIVAFVDRLLGCQKHCWLGERLLQTFDENLLPKVVMDYKLASCFPLFDRIAENDT
IPPSRLLELLIKFMVFLVEKHGPDTGLKSWSKGSKVLGVCRTMLMHHHSSRLFLRLSRLL
AFTCLYFPDLEVRDNARIYLRMLICVPGKKLRDMLNLGDQLLGISPSPLSNSIFNIQSPR
TSYNIKKSRNISSYVHLDRVVPLLVKQSWSLSLSTLGVDSNKPGYLEGIRDSESPVEERE
IDGSAEIHIPETETISQPQEPLRVMDSKISEILGTLRRYFSSIPDYRHMQGIKVRISCTL
RFKSEPFNREWGVYSPASGLDRVDALPAIYATVLNFSSSAPYGSLPSYHIPFLLGEPSKN
DSDSHQQVPLDIVLVENGNVEEESVRAPVMIELEPREPTPGLIDVSIVTNTENGHIIRAR
LHSIPIGIEDMFLMATVPSDIPKEVIPGYYSDLFSALWEACGSSSNTGRETFPLKGGKGV
AAISGTQSVKLLEVPSTSLIRATERYLAPFVVSVIGEPLVNLVKDGGIIRDIIWKDVASD
SSLVDTTSVASFDRGPLHLTYFDDEDERDSVVSTSKRNMGCFLILIFLPPRFHLLFQMEV
CDVSTLVRIRTDHWPCLAYIDDYLEALFLA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgaagcctctctccccacaagactgggagtccctcatcgaagatttccaacac
ggcggttcacgccgccacaaatggagctcgaccccctcaatcctcgacctcgctctctcc
tcaatcctcaaaaaggactttcctctcaaaatccaactcataatcttcctcgaagaattc
tcagacagtttcctagatttcgatgaacacttcttagaacgactcgtcgacacccttaaa
atcataatccaatccccaactgataatctcttcattactatgtctctcaaagaccaaatg
ttagtttccaccacttccattttcatctccaccatccaccaattcaacatcatcatcatc
gagagcttggtcgagttcttgttgatcctcatcaaccgtcccaaccatggacccgaccgc
cagacacgtggcgtggcttgtgagtgcttgagagaactcgagcgatctcacccttgttta
ctctcccacatcgctggtcatctctggagtttgtgtcaaaacgagcgaacccatgtgact
caaagctacatgcttttgttcacatgggtcattcataatattgttgttcacaatgtcaat
gtttccattcttaacacctctgttcctttggttcctttcaatgttccgcaatcgttgttg
ttatccgatgcttgttcttcgacttcgaatgggactaataattataattacaaggagctg
aggcgggccatggcgttcttgcttgaatcgccgcaggttttgacggcttgcggaatggtg
gagttcatggctgtgataattcccattgcggtcgcattagagttacaggcgtcgatgttg
aaggtacagttctttgggatggtttattcctatgatccaatgctgtgtcatgttgttttg
aagttgtatttgagtttctttgatgcgtttgatgggcaagaaggcgagattgctcgtcgt
cttatgttgatatctaaagaagcacagagctttttggtgtttcggttgcttgctcttcat
tggttgttgggtcttaaccaatcggttttgagtagtaaaggtgataagaagaaaaagaag
ccaatggcttttgattcgatgggtttgagcttttatcccaatgtgtttgatccgcttgct
ctcaaggccttgaagcttgacctgctcgcgctatgtatggagagcttgaaatccaagagt
gattcagagatgggcgactctgtggagaaggtgtttgaagatggtattgtgtctgtatcg
gcttacaagtggttgcctccacggagcactgaaaccgcagtggccttccgtgccttccat
aagttcttgattggtggttcgtctcattttgacactgatccttctaccactacaactatc
atggagtccaccatcttccattctttgcaggggatgctattggacatgatgttagagtgt
caaaagttggttccagtgattgttgcttttgttgaccgcttgttgggctgtcaaaagcat
tgttggttgggagagcgcctgcttcagacatttgatgagaatttgcttccaaaagttgta
atggattataaattggcttcttgcttccctttatttgatagaatcgctgaaaatgataca
atacctccaagcagattgttagagctgctgatcaaattcatggttttccttgttgagaaa
catggcccagatacaggactaaaatcatggtctaagggaagtaaggttcttggtgtctgt
cgaaccatgctgatgcaccaccatagctctagattgttcctgagactatctcgcctcctc
gcatttacttgcctttattttcctgatttggaggtacgtgacaatgcaaggatctatctg
cggatgctgatctgtgtaccaggaaagaagcttagagacatgctaaaccttggggatcag
ctccttggcatttcaccatctccactttccaactcaatttttaacatccagtctcctcga
acctcttacaatatcaagaaatctaggaacatctcatcctatgttcaccttgatcgagtg
gtacccttacttgtcaaacaatcttggtccttgtctttatcgactttgggtgttgacagt
aacaaacctggttacctagagggcatcagagacagtgaatccccagttgaggaaagagag
attgatggaagtgctgaaatccacatcccagagactgaaacaattagtcagccacaggag
ccattgcgagtgatggattcgaagatttcagagatcttaggaacattaagaaggtatttc
tcaagcatacctgattatagacatatgcaagggattaaggttagaatatcctgtactttg
agattcaaatctgagccttttaatcgcgaatggggagtatactcccctgctagtgggttg
gatagagtagatgcccttcctgctatatatgcaactgtgcttaatttttcatcctctgca
ccatatggatctcttccatcataccacataccttttctccttggtgaaccttctaaaaat
gactctgattctcatcaacaagtgcctttagatattgttttagtagaaaatggtaatgtt
gaagaggaaagtgttagagctcctgtaatgattgaattagaaccacgggaaccaacacct
ggtctgattgatgtatctattgtaacaaatacggaaaatggtcacattattcgtgctcgg
cttcatagtattccaataggcatagaagacatgtttctcatggctactgtcccatctgac
atcccgaaagaggttatacctggttattactcagacttgttcagtgctctttgggaggca
tgtggtagttcatccaacactgggcgggagacctttccactgaaaggaggcaaaggagtt
gcagccattagtgggacccaatcagtcaagctacttgaagtcccttcaacctctttgatt
cgggctacagagcgctacttggctccgtttgttgtaagcgtgattggtgaaccacttgtc
aaccttgtgaaggatgggggaatcattagagatatcatctggaaggatgtggcttcagat
tcttcccttgttgataccacctcagtagctagttttgatagaggcccacttcatcttaca
tactttgatgatgaagatgagagggacagtgttgtcagtaccagcaaaagaaatatgggt
tgctttcttattttgatatttcttccaccaaggttccatcttcttttccaaatggaagta
tgtgatgtttcaactttagttcgaattcgaactgatcattggccctgcttagcttatatt
gatgattatttggaagctttatttttggcgtag
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