Castanea sativa (European chestnut): 142641568
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Entry
142641568 CDS
T11266
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin 11-like
KO
K08770
ubiquitin C
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
142641568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csaa04121
]
142641568
Ubiquitin system [BR:
csaa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
142641568
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
DUF2604
Ubiquitin_2
Rad60-SLD_2
Ubiquitin_5
TBK1_ULD
Dsc3_N
UBL_UBAC1
Plexin_RBD
Motif
Other DBs
NCBI-GeneID:
142641568
NCBI-ProteinID:
XP_075672128
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All DBs
Position
6:55613834..55614409
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AA seq
185 aa
AA seq
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KISGIPPDQQRLIFAEKQLEEGRTLADYNTQKESTLDLALRLRGGTQIFVKTQTEKTXKX
GIPPDQLRLIFARKQLEDGRTLADYNIQKESTPLLVLRLRGGMQIFMKTLTGKTITLEVE
SSDTINNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGQQ
ISLKV
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
aaaattagtgggattccgccggaccagcagaggctcatcttcgccgagaagcaattggag
gaaggccgtaccctcgccgattacaatacccagaaagagtctacgcttgaccttgcgttg
aggctccgtggaggcacgcagatctttgtgaaaacccaaactgagaagacgngaaagtag
gggattccgccagaccagctgaggctaatcttcgccagaaagcaattagaggacggccgc
accctcgccgattacaacattcagaaggagtctacccctctcctggtgttgaggctccgt
ggaggtatgcagattttcatgaagactctgacggggaagacaattactttggaggtggag
agctccgatacgatcaataatgtgaaggccaagattcaagataaggaggggatccctccg
gatcagcagagactgatctttgcagggaagcaattggaggatgggcgcactctagctgat
tacaacattcaaaaggagtccactcttcaccttgttcttcgtcttcgcggtggccagcaa
atttctttgaaggtttaa
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integrated database retrieval system
