Chlorocebus sabaeus (green monkey): 103221515 Help Entry 103221515         CDS       T04361                                  Symbol SKIV2L2 Name (RefSeq) Ski2 like RNA helicase 2   KO K12598   ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] Organism csab  Chlorocebus sabaeus (green monkey) Pathway csab03018   RNA degradation Brite KEGG Orthology (KO) [BR:csab00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     103221515 (SKIV2L2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csab03019]     103221515 (SKIV2L2)    03041 Spliceosome [BR:csab03041]     103221515 (SKIV2L2)    03009 Ribosome biogenesis [BR:csab03009]     103221515 (SKIV2L2)    03016 Transfer RNA biogenesis [BR:csab03016]     103221515 (SKIV2L2) Enzymes [BR:csab01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      103221515 (SKIV2L2) Messenger RNA biogenesis [BR:csab03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     TRAMP complex      103221515 (SKIV2L2) Spliceosome [BR:csab03041]  Complex B   U4/U6.U5 tri-snRNP components    U4/U6.U5 tri-snRNP related factors     103221515 (SKIV2L2)  Complex C    U4/U6.U5 tri-SnRNP related factors     103221515 (SKIV2L2) Ribosome biogenesis [BR:csab03009]  Eukaryotic type   Pre-60S particles    Helicases     103221515 (SKIV2L2) Transfer RNA biogenesis [BR:csab03016]  Eukaryotic type   tRNA degradation factors    TRAMP complex     103221515 (SKIV2L2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DSHCT MTR4_beta-barrel DEAD MTR4-like_stalk Helicase_C DEXQc_Suv3 ResIII nSTAND3 AAA_22 Motif Other DBs NCBI-GeneID:  103221515 NCBI-ProteinID:  XP_007970822 Ensembl:  ENSCSAG00000016445 LinkDB All DBs Position 4:51543976..51667458 Genome browser AA seq 979 aa AA seqDB search MADAFGDELFSVFESDSTNEAGTKKDKEKDKGKWKGPPGSADKAGKRFDGKLQSESTNNG KNKRDVDFEGTDEPIFGKKPRIEESITEDLSLADLMPRVKVQSVETVEGCTHEVALPADE DYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALR EKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGS EVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLH KQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGD QKGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMV EEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALF ATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVD EKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRAIPG VVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLV KVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKP DEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQIAIDIKSAKRELKKAR TVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAE QATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLSSFK PHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKF AEGITKIKRDIVFAASLYL NT seq 2940 nt NT seq  +upstreamnt  +downstreamnt atggcggacgcattcggagatgagctgttcagcgtgttcgagagcgactcgaccaatgag gcgggaaccaaaaaagacaaggaaaaggacaaggggaaatggaaggggcctccagggtct gcagacaaggcagggaaacgttttgatggtaaattacaatcagaatcaactaataatgga aaaaataagagagatgtagatttcgaaggtacagatgaacccatttttggaaagaagccc aggatagaagagtcaataactgaagacttaagtttggcagacctgatgcccagagtcaag gtacaatcagttgaaactgttgaagggtgtacacatgaggttgcacttcctgcagatgaa gattatttaccacttaaacctcgagttggaaaagctgctaaggaatacccattcattctt gatgcttttcaaagagaagccattcagtgtgttgacaataatcagtctgttctagtatct gcacatacatcagcgggaaaaacagtatgcgccgagtatgccatcgcattggccttaagg gaaaagcagcgtgtaatatttaccagcccaattaaggctctgagtaaccaaaaataccgt gaaatgtatgaagaatttcaagacgttggtttgatgactggtgatgttactattaatcct acggcatcttgtcttgttatgaccacagagattttgagaagtatgctttacagaggttct gaagttatgcgagaagttgcttgggttatatttgatgaaattcattatatgagagattca gaacgtggtgtagtatgggaagaaactattattttgcttcctgataacgtccactatgtc tttctttcggctactattccaaatgcccgacagtttgctgaatggatttgccatttacat aaacagccttgtcatgtaatttacacagattatcgacccactccattgcaacactacatt tttccagcagggggagatggcttgcatcttgtggttgatgaaaatggtgacttcagagaa gataattttaatactgcaatgcaagtgcttcgagatgcaggtgatttggccaaaggagac cagaaagggcggaaaggaggaacaaaaggaccatcaaatgttttcaaaattgtgaagatg attatggaaagaaatttccaacctgtgattattttcagttttagtaagaaagattgtgaa gcctatgcacttcaaatgaccaaattagatttcaacacagatgaagaaaagaagatggtt gaagaagtattcagtaatgcaattgattgcttatccgatgaagataaaaaactccctcag gtagaacatgtacttcctcttttgaagaggggaattggtattcaccatggtggtttactt cctattttgaaagaaactatagaaattctcttttctgaaggattgataaaggccttattt gccacggagacttttgctatgggaattaacatgccagctagaactgttttatttacaaat gcccgcaaatttgatgggaaggatttccggtggatttcttctggtgaatacattcagatg tctggtcgtgctggaaggagaggaatggatgatagaggaattgtaattcttatggtagat gaaaagatgagcccaacaattggaaaacaattacttaagggctccgctgatcctctaaat agtgctttccatttgacctacaacatggttttgaacttactacgtgtagaagaaattaat cctgagtacatgttggaaaaatccttctatcagtttcagcattatcgagcaattccagga gtagtagagaaggtaaagaattcagaagaacagtataataaaatagtaattcccaatgaa gaaagtgtggttatctattataagattagacagcagcttgccaaattgggtaaagaaatt gaagaatatattcacaaaccaaaatattgcttaccttttctacaaccaggtcgtttggta aaggtaaagaatgaaggagatgactttggctggggagtagtggtgaatttctcaaaaaag tcaaatgttaagcctaactctggtgaactggatcctttgtatgtagtagaagtacttctt cgctgtagcaaagagagcttgaaaaattcagctacagaagctgcaaaaccagctaaacct gatgagaaaggagagatgcaggttgtcccagttttggtgcatctcctgtctgctatcagc agtgttaggctttacattcctaaagaccttcggccagtggacaatagacagagtgtttta aagtcaatacagattgcaatagatattaaatctgcaaagcgagaactgaagaaagcgaga acagtcctacaaatggatgaactcaaatgtcgcaaacgtgttttaagaaggttgggattt gctacttcttctgatgtaatagagatgaaaggacgagtggcctgtgagataagcagtgct gatgagctccttctaactgagatgatgtttaatggccttttcaatgacctttctgcagaa caggcaacagcattattaagctgctttgtgtttcaagagaattctagtgagatgcccaaa ttaacagaacaattagcaggaccacttcgtcaaatgcaggaatgtgctaaaagaatcgca aaagtttcagcagaagccaaattggaaattgatgaggaaacttatctaagctcatttaaa cctcacttaatggatgtagtatatacctgggcaactggagctacatttgcccatatctgc aaaatgacagatgtctttgaaggcagcataattcgttgtatgaggcgcctagaagaattg cttcgacaaatgtgtcaagcagcaaaagccattggaaacactgagctggaaaataaattt gcagaaggaatcaccaaaatcaagagagatattgtgtttgctgccagcctctacttgtag

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