| Entry |
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| Symbol |
TNRC6C
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| Name |
(RefSeq) trinucleotide repeat containing 6C
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| KO |
| K18412 | trinucleotide repeat-containing gene 6 protein |
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| Organism |
csab Chlorocebus sabaeus (green monkey)
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| Brite |
KEGG Orthology (KO) [BR:csab00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csab03019]
103242964 (TNRC6C)
03036 Chromosome and associated proteins [BR:csab03036]
103242964 (TNRC6C)
Messenger RNA biogenesis [BR:csab03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103242964 (TNRC6C)
Chromosome and associated proteins [BR:csab03036]
Eukaryotic type
Gene silencing
piRNA pathway
103242964 (TNRC6C)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
16:complement(43610595..43718117)
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| AA seq |
1969 aa
MIIKLTLVFFVFNREKEQETQEEERLMEEKKKKKQEEKKKKEGAQKKAADQKTKVPEPTK
TCSSQPQPAGTSTSTSTSTISSSNNGKRSCAGGQQPAASRYLPREVPPRFRQQEQKQLLK
RGQPLPTGTLTSVSPTQGAGPAGVSPPPLPGAGTQHHPSKLQPDLSHSGLADHYENSHWG
QQPTYRNEANCSWDKVIIDRTDKEAWPSITGTETESASECTTDTDSASNCGSENSSMATG
SAQGNFTGHTKKTNGNNGTNGALVQSPSNQSALGAGGANSNGSATRVWGVATGSSSGLAH
CSISGGDGKMDTMIGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVATGNPS
SICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQESTEPQTSTSQNVSFSAQPQNLNTDGP
NNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIPPHLQSLPGANGSSVSQVSGGSAEGI
SNSVWGLSPGNPATGNSNSGFSQGNGDTVNSALSAKQNGSSSAVQKEGNGGNAWDSGPPA
GPGILAWGRGSGNNGVGNIHSGAWGHPSRSTSNGVNGEWGKPPNQHSNSDINGKGSTGWE
SPSVTSQNPTVQPGGEHMNSWAKAASSGTTASEGSSDGSGNHNEGSTGREGTGEGRRRDK
GIIDQGHIQLPRNDLDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCAAT
QPSNSGGKNDGSIMNSTNTSSVSGWVNAPPAAVPANTGWGDSNNKAPSGPGVWGDSISST
AVSTAAAAKSGHAWSGAANQEDKSPTWGEPPKPKSQHWGDGQRSNPAWSAGGGDWADSSS
VLGHLGDGKKNGSGWDADSNRSGSGWSDTTRSGSSGWGNSTNTKANPGTNWGETLKPGPQ
QNWANKPQDNNVSNWGGAASVKQTGTGWIGGPVPVKQKDSSEATGWEEPSPPSIRRKMEI
DDGTSAWGDPSNYNNKTVNMWDRNNPVIQSSTTTNTTTTTTTTSNTTHRVETPPPHQANT
QLNRSPLLGPVSSGWGEMPHVHSKTENSWGEPSSPSPLVDNGTAAWGKPPSSGSGWGDHP
AEPPVAFGRAGAPGAASALCKPASKSMQEGWGSGGDEMNLSTSQWEDEEGDVWNNAASQE
STSSCSSWGNAPKKGLQKGMKTSGKQDEAWIMSRLIKQLTDMGFPREPAEEALKSNNMNL
DQAMSALLEKKVDVDKRGLGVTDHNGMAAKPLGCRPPISKESSMDRPTFLDKLTLSFSNQ
DGGLVEEPTPSPFLPSPSLKLPLSHSALPSQALGGIASGLGMQNLNSSRQIPSGNLGMFG
NSGAAQARTMQQPPQPPVQPLNSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLT
SPVNPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGSMRQQEQQVARTITNLQQQIQ
QHQRQLAQALLVKQPPPPPPPPHLSLHPSAGKSAMDSFPSHPQTPGLPDLQTKEQQSSPN
TFAPYPLAGLNPNMNVNSMDMTSGLSVKDPSQSQSRLPQWTHPNSMDNLPSAASPLEQNP
SKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNSESPASPPVAVPHSWSRAKSDSDKISNG
SSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSGGSSPP
SSQNATLPSSSAWPLSASGYSSSFSSIASAPSVAGKLSDIKSTWSSGPASHTQASLSHEL
WKVPRNTTAPTRPPPGLTNPKPSSTWGASPLGWTSSYSSGSAWSTDASGRTSSWLVLRNL
TPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILA
EFAGEEEVNRFLAQGQALPPTSSWQSSSASSQPRLSAAGSSHGLVRSDAGHWNAPCLGGK
GSSELLWGGVPQYSSSLWGPPSADDSRVIGSPTPLTTLLPGDLLSGESL |
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| NT seq |
5910 nt +upstreamnt +downstreamnt
atgatcatcaaacttacactggttttctttgtatttaatagggagaaagagcaagaaaca
caagaagaggaacgtttgatggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaag
aaggaaggtgctcagaaaaaggctgctgatcaaaaaaccaaagtgccagaacctactaag
acctgttcaagccagccccaacctgccggtaccagtaccagtacttccaccagcactatc
tccagcagcaacaatggcaaacgttcatgtgccggtggccagcagccagctgcatcccgt
tacctgcctcgtgaggtgcctccacgcttccgccagcaagaacagaagcagctattaaag
agaggccagccattgcctacggggactctaaccagtgtgagcccaacccagggtgctggg
cctgcaggggtaagcccacctcccctacctggagccggaacacagcatcatcccagtaag
ctccaaccagatctcagtcatagtggattggcagatcattatgaaaattcccactgggga
cagcagcctacttacagaaacgaagccaactgcagctgggataaagtgataatagatagg
actgacaaggaggcgtggccttccatcacaggaacagagactgaatctgcctcagaatgt
actacagatactgactctgcctccaactgtggctcagagaacagtagcatggctacaggg
agtgcccagggcaacttcactggacataccaagaagacaaatggcaataatggcaccaat
ggcgcactcgtccaaagcccttctaatcagagtgcccttggagcagggggagcgaacagt
aatggaagtgcgaccagagtgtggggtgtagccacaggctccagctctggcctggctcac
tgctctatcagtggtggggatggaaaaatggacactatgattggagatgggagaagtcag
aattgctggggtgcttccaactccaatgctggcattaatcttaaccttaatcctaatgcc
aacccagctgcctggcctgtacttggacatgaaggaaccgtggcgacaggcaacccttcc
agtatttgcagtccagtcagtgccataggtcaaaatatgggcaaccagaacgggaaccca
acaggcactttaggtgcttggggaaacttgctgccgcaagagagcacagaaccacaaacg
tccacttctcagaatgtgtctttcagcgcacaacctcagaaccttaacactgatggacca
aataacactaaccccatgaactcttcacccaaccctatcaatgcaatgcagacaaatgga
ctgccaaactggggcatggctgttggtatgggggccatcatcccgccccacctgcaaagc
cttcctggtgctaacggatcatcagtttctcaagtcagtgggggcagtgctgaaggaata
agcaattctgtatggggactgtccccaggtaaccctgccacaggaaatagcaattctggg
ttcagtcaggggaatggagacactgtgaactcagcattaagtgctaaacaaaacggatcc
agcagtgctgtgcaaaaggaaggaaatggaggaaatgcttgggattcaggacctcctgct
ggtcctggaatactcgcctggggaaggggcagtggcaacaatggcgttggtaatatccat
tcgggagcttggggccaccccagccgaagcacctctaacggtgtgaatggggaatgggga
aagcccccaaaccagcattccaatagtgacatcaatgggaaaggatcaacagggtgggag
agtcctagtgtcaccagccagaaccctaccgtgcagcctggtggtgaacacatgaactcc
tgggccaaagcggcatcttctggaactacagcaagtgaaggaagtagtgatggttctggc
aaccacaatgaaggaagcactgggagggaaggaacgggagaaggtcgaaggcgagataaa
gggattatagaccaagggcatatccagttgccaaggaatgatcttgacccaagagttcta
tctaatactggttggggacagactcctgtaaagcaaaacactgcctgggaatttgaagaa
tcccctaggtctgaaaggaaaaatgacaatgggacagaggcctggggttgtgcagctact
cagccttcaaactcaggggggaagaacgatgggtccatcatgaacagtacaaatacctct
tcagtatctgggtgggtcaatgcgccacctgccgctgtgccagcaaacacaggttgggga
gacagcaacaacaaagcgccaagtggtccgggggtttggggggactcgataagctctact
gctgttagtactgctgctgctgccaagagtggccatgcttggagtggggccgcaaatcag
gaggacaagtcacccacctggggtgagcctccaaagcccaaatcccaacactggggagat
ggacaaagatcaaatccagcctggagtgctggagggggagattgggcagattcatcgtct
gtccttggacacttgggggatgggaaaaaaaatggatctggatgggatgctgacagtaat
aggtcagggtctggttggagtgacaccacgagatctgggagcagtggctggggcaacagc
acaaatacaaaggccaatccaggtacaaactggggggagactttaaaacctggcccccaa
cagaactgggctaacaaaccccaagacaacaatgtgagtaactggggaggagctgcttct
gtgaaacagacaggaacagggtggatcggggggccagtaccagtcaaacagaaggacagc
agtgaggcaactggctgggaagaaccctctccaccgtccattcgccgcaaaatggaaatt
gatgatggtacctcagcttggggggacccaagcaactataacaataaaactgtaaacatg
tgggatagaaacaacccggtcatccagagcagtaccacgaccaataccaccaccaccacc
actaccacgagcaacaccacacacagggtcgagacgccgccaccgcaccaggccaatact
cagctgaatcgatcaccattgctcggtccagtttcatcaggctggggagaaatgcctcat
gttcactcaaagactgaaaactcttggggagaaccatcctccccttctcccctggtggat
aatggcacagcagcgtgggggaagccacccagcagtggtagcgggtggggagatcaccct
gccgagccgccagtggcgtttggaagagctggcgcacctggtgctgcctcagccctgtgc
aaaccagcttcaaaatctatgcaagaaggctggggcagtggtggggatgaaatgaacctc
agtaccagccagtgggaggatgaagaaggggacgtgtggaataatgctgcttcccaagaa
agcacctcctcctgcagctcctgggggaatgcccccaaaaaaggacttcaaaagggcatg
aagacatctggcaagcaggatgaggcctggatcatgagccggctgatcaaacaactcaca
gacatgggcttcccgagagagccagccgaggaggccttgaagagtaacaatatgaatctt
gatcaggccatgagcgctctgctggaaaagaaggtggacgtggacaagcgtgggctggga
gtgaccgaccataatggaatggccgccaagcccctcggctgccgcccgccaatctccaaa
gagtcttccatggaccgccccacctttcttgacaagctcaccctttctttctccaatcag
gatggcggcctcgtggaagagcccacgccttcaccgttcttgccttccccaagcctgaag
ctccccctttcacacagtgcactccccagtcaggccctgggtgggattgcctccgggctg
ggcatgcaaaacttgaattcttctagacagataccgagtggcaatctgggtatgtttggc
aatagtggagcagcacaagccaggaccatgcagcagccgccacagccaccagtgcagcct
cttaactcttcccagcccagtctccgtgctcaagtgcctcagtttctatcccctcaggtt
caagcacagcttttgcagtttgcagcaaaaaacattggcctcaaccctgcactattaacc
tcgccagttaatcctcagcatatgacgatgttgaaccagctctatcagctgcagctggca
taccaacgtttacaaatccagcagcagatgttacaggcccagcgtaatgtgtccggatcc
atgagacaacaggagcagcaagttgcgcgcacaatcactaatctgcagcagcagatccag
cagcaccagcgccagctggcccaggccctgcttgtgaagcagccaccaccgccaccgccc
ccgccgcacctgtctctgcacccctctgcaggcaaatcggccatggacagcttcccctcg
cacccacagactcccggcctacctgacctgcagaccaaagagcagcagtcttcacccaac
acctttgctccttaccctcttgctggactgaacccaaacatgaatgtcaacagcatggac
atgaccagtggcttgtcggtgaaggacccatcccagtcccagtcacgcctcccccagtgg
acgcaccccaactccatggataacttgcccagtgccgcttcccccctggagcagaaccct
agcaagcatggtgctatccctggaggtctaagcattgggcctccaggtaagtcctccatt
gatgactcctatggccggtacgatttaatccagaacagtgagtcaccagccagtcctccc
gtagctgttccccatagctggtcacgtgccaaatctgacagtgataaaatctcaaatggc
tctagcatcaactggcccccagaattccatccgggagttccatggaaaggactacagaat
attgaccctgagaatgaccctgacgtcactcctggcagtgtccccactgggcctaccatc
aataccaccatccaggatgtcaaccgctacctcctcaagagtggagggtcctccccgcca
tcatctcagaatgccacgctgccttcctcgagtgcctggccgctcagtgcctccggctac
agtagctctttcagcagcattgcatccgcacctagcgttgcaggtaaactgtcagacatt
aaatcaacgtggtcctctggccctgcctcccacacgcaagcctctctgtctcatgaactg
tggaaggtgcccagaaacactactgcacccacgaggccacctccagggttaaccaatccc
aagccctcctccacctggggtgccagcccccttggctggaccagctcctactcctcaggt
tctgcctggagcaccgacgcctcaggaagaaccagcagctggctcgttcttcgaaacctc
actccccagattgacggttctacactgcggacattgtgtttgcaacatgggcctctcatc
acattccacctgaatctgactcaaggcaatgccgtggtccggtatagctccaaggaggag
gctgccaaggcccagaagtctttgcacatgtgcgtcctgggaaacactaccatcctggct
gagttcgctggcgaagaagaagtgaatcgcttcttagcccaaggccaggcgctgccaccc
acctccagctggcagtccagtagcgcgtccagccagccgcggctcagcgcagcgggcagc
tcccatggcctggtgcgcagcgacgctggccactggaatgccccatgcctgggtggcaag
gggagcagtgagctgctgtggggtggagtgccccagtactccagcagcctgtggggcccg
cccagcgctgacgacagcagggtgatcggcagccccacccctctgaccaccctgctgcct
ggggacctactcagcggggagtccctgtag |
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