Chitinophaga sancti: SIO70_10225
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Entry
SIO70_10225 CDS
T09582
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csac
Chitinophaga sancti
Pathway
csac01501
beta-Lactam resistance
csac01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SIO70_10225
01503 Cationic antimicrobial peptide (CAMP) resistance
SIO70_10225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csac02000
]
SIO70_10225
01504 Antimicrobial resistance genes [BR:
csac01504
]
SIO70_10225
Transporters [BR:
csac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SIO70_10225
Antimicrobial resistance genes [BR:
csac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SIO70_10225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
WPQ65218
LinkDB
All DBs
Position
complement(2411943..2415083)
Genome browser
AA seq
1046 aa
AA seq
DB search
MLKTFIERPVLSTVISVIIVILGILGLVSLPIAQYPDIAPPTVQVSASYTGANADVVLNS
VIVPLEEQINGVEGMTYMTSTATNDGSATINVYFKVGRDADQAAVDVQNRVSTASSLLPA
EVTQAGVTVKKQQSSNLLISAFYSENPAYDQTFLQNYVEINLIPALKRVNGVGNASAFGS
MNYSMRIWLKPDVMSVYGLTPADVTDAMSDQNIEAAPGKFGEQGNQSFQYVIRYSGKLKS
IDEFGNIIIKSTGNGQFLRLKDIARIELGAQSYSSMATVNGYPATNVSVSQTAGSNASQV
INDCKAVIAEAEKNFPKGIHTTNLVDINKFLDASIEKVIHTLIEAFVLVFIVVFIFLQDF
RSTLIPAISVPVAIIGTFFFLNLFGFSINLLTLFALVLAIGIVVDDAIVVVEAVHAKLDT
GYKSARKASIDAMSEISGAIVSITLVMSAVFVPVTFISGSSGVFYKQFGITLAIAIILSA
INALTLSPALAALFLKPHSEEHKKKNVLQRFYTSFNTAFDTVTTKYTRSVTFLSKKLWLV
LLGVAAFGGGLYYLMTSTSSSFVPDEDMGTIFVNISMPPATSMERTTVIANELDSICHTI
PAVNNTLRMAGQNLLAGSGSSYGMIILELKKWSDRTMSNNDVIGALMQKTAHIREAQIMP
MSLPTITGFGIAGGFSFQLQDKGGHSTAEFYKVAQDFLAQLSKRPEIQYASTTFNPNFPQ
YLMEVNVAKVKEAGLTVNNVMNAMQVYYGGYYASNFNLYGKQYRVMIQADTAYRANIEGL
NKIYVRTSDAKMAPISEFVTLTRAYGPESIARFNLFTAMAVNGAPNAGYSSGQALKAIQE
VAAEKLPPGYGYEFSGISREEQSSGSQSTYVFILCLVFVYFLLSAQYESYLLPFAVLLSL
PFGLTGTFLFARIFGIDNNIYLQISLIMLIGLLSKNAILIVEYAVERRRHGMTMLDSAVE
GAKARFRPILMTSFAFIFGLMPLMFATGAGANGNRSIGTAAVGGMLFGTVIGVFMIPVLF
IIFQTLQEKVSTKKHEEEDEDTTIKA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagacatttatagaacgtcctgtactcagtaccgtgatctcggtgatcattgtc
atattgggtatcctgggactcgtatcgcttccgatagcgcaatacccggatatcgctcct
cctacagtacaggtgtccgccagttatacgggagctaatgccgacgtggtattgaatagt
gtgatcgtgccgctggaagaacagatcaatggtgtggaagggatgacttacatgacctcc
actgctaccaacgatggtagcgccaccatcaacgtatattttaaagtgggaagggacgcc
gaccaggcagctgtagacgtgcaaaaccgcgtatctaccgcttccagcctcctgccagct
gaagtaacacaggcaggcgtaacagtgaaaaagcaacagagtagtaatctgctcatctcc
gctttttatagcgagaaccctgcttatgaccagactttcctgcaaaactatgtagaaatt
aacctgatccctgccctgaaaagggtgaacggggtaggtaatgcaagcgccttcggtagc
atgaactactccatgcgtatctggctgaaacctgatgtcatgtccgtttacggacttacg
cctgctgatgtaaccgatgcgatgagtgaccagaacatagaagccgcgcctggtaaattt
ggtgaacagggtaatcaaagctttcagtacgtaatccgctattccggcaaactgaaaagc
atcgatgaatttgggaatattattatcaagtcgaccggcaacggacaatttctacgcctc
aaagatattgctcgcattgaactgggtgcccagtcttacagcagtatggctactgtgaac
ggctatcctgctaccaacgtatctgttagccaaacggcaggttccaatgcaagccaggtt
attaatgattgtaaagcagtgattgctgaagcggaaaagaatttcccgaaaggaatacat
actaccaacctggtagatatcaataaattcctggatgccagtatcgagaaggtaattcat
accctgatcgaagcatttgtgctggtattcattgtggtattcatcttcctgcaggacttc
aggtctaccctcattcctgcgatttccgtaccagtggcgattattggtaccttcttcttc
ctaaatctgtttgggttcagtatcaatctgctgaccctcttcgcattggtactggccatt
ggtatcgtggtggatgatgcgatcgtcgtcgtcgaggccgtacacgccaaactggatacg
ggatataaatctgccaggaaggcctctattgatgcgatgagtgaaatctccggcgcgatc
gtttccattacccttgtaatgtcagcggtattcgtacctgttactttcatcagtggttct
tcgggtgtgttctataagcaatttggcattaccctcgctattgccatcatactttccgct
atcaacgcattgacgctcagccctgcactggcagccctttttctgaaaccacattcagaa
gaacacaagaaaaagaatgtattacaacggttttatacttcattcaataccgcttttgat
actgttactactaaatatacgcgctctgttaccttcctttcaaagaaactgtggctggtg
ttattaggtgttgcagcatttggcggtgggctttattacctgatgacttccacttccagc
agctttgtgccggatgaggacatgggtaccatattcgtaaacattagtatgccacccgct
accagtatggagcgtaccactgttatcgccaatgaactggatagcatctgccatactatt
ccggcggtgaacaatacccttcgtatggcaggtcagaacctgctggcaggtagcggtagt
tcatatggtatgatcatcctggaactaaaaaaatggagtgatcgtacgatgagcaataac
gatgtaattggcgccctgatgcaaaaaacagctcatatcagggaagcgcagattatgccg
atgtcactgcctaccattactggtttcggtattgctggtggtttctccttccagctgcag
gataaaggtggacattcgaccgctgagttctataaagtagcacaggatttcctggcacaa
ctgagcaaacgccctgaaatccagtatgcttctaccaccttcaacccgaactttcctcaa
tacctgatggaagtaaatgtggctaaagtgaaagaagcaggtctgactgtgaacaatgtg
atgaatgcgatgcaggtttattatggtggttattatgcttccaacttcaacctgtatggt
aaacaataccgcgtaatgatacaggcagataccgcctacagggcgaatattgagggattg
aacaagatatatgtacggacctctgatgccaaaatggcgccgatcagtgagtttgttacc
cttaccagggcatatggtccggaaagtatagcacgcttcaacctgttcaccgccatggca
gtaaatggtgctccaaatgcaggttatagctccggtcaggcattaaaagcgatccaggaa
gtggctgcagagaaactgccaccgggctatggatatgagttttccggtatcagccgtgaa
gaacaatccagtggttcccagtcgacatatgtgttcatcctctgcctggtattcgtatac
ttcctgctgagtgctcagtatgaaagttacctgctgccattcgcagttctgttgtcactg
ccgtttgggcttacagggaccttcctctttgcccgcatctttggtattgacaataatatc
tatctccagatttccctgatcatgctgataggtctactgtctaaaaacgccatcctgatc
gtagagtatgcggtggaaagacgacgacacggtatgactatgctggattcggcggtagaa
ggtgcgaaagcccgtttccgacccatcctcatgacatcttttgccttcatctttggtctg
atgccactgatgttcgctaccggcgccggtgcgaatggtaaccgctctattggtacagcg
gcagtaggcgggatgctctttggtaccgtgataggcgtattcatgatccctgtattattc
atcatcttccagaccttacaggaaaaagtaagtaccaaaaagcatgaagaagaagatgag
gatactacaataaaagcgtaa
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