Chitinophaga sancti: SIO70_11930
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Entry
SIO70_11930 CDS
T09582
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csac
Chitinophaga sancti
Pathway
csac01501
beta-Lactam resistance
csac01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SIO70_11930
01503 Cationic antimicrobial peptide (CAMP) resistance
SIO70_11930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csac02000
]
SIO70_11930
01504 Antimicrobial resistance genes [BR:
csac01504
]
SIO70_11930
Transporters [BR:
csac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SIO70_11930
Antimicrobial resistance genes [BR:
csac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SIO70_11930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WPQ65558
LinkDB
All DBs
Position
2838920..2842087
Genome browser
AA seq
1055 aa
AA seq
DB search
MFSNILKRPVLSIIISVLIVFLGILGITQLPITQFPAISPVTVKVSAEYPGANGELLVKT
VIIPLERAINGVPGMKYMTSDATNTGEANIQIIFNLGTDPNTASLNVQNRIAKVLNKLPP
LVIREGLLTSLEQPAMLMYLNLYSKDPKTDERFLYNFADINIMPELTRLQGVGSARILGT
REYSMRIWLKPDRMLAYKISSEEVMEALGNQSLEASPGKTGESSGKRSQAFEYVMKYSGR
FSTKEEYENIVLRANPNGELLRLKDVADIEFGSLFYDIYSNLNGRPSAAIVVKQLYGSNA
SKVIEEVKAKLQELKKTTFPAGMDYAISYDVSKFLDASIEKVIHTLVEAFVLVGIVVFIF
LGDWRSTLIPTLAVPVSLVGTFIFMGMFGLTMNMITLFALVLAIGIVVDNAIVVMEAVHA
KMEEEHLSPYMATKKVVHEIAGAVIAITFLMVAVFVPVAFMTGPVGVFYRQFAITMAVSI
VLSGVVALTLTPALCAMILKNNHGVPKKKNLLTKGLDAFNRSFERLTGRYTGLLKKIVNV
RTVTWGMLIGFCLLTWGISSTLQTGFIPAEDQGMIYGIIQAPPGSSLERTNEIAERLQKI
AEKIDGISSVSALAGYEILTEGTGSNAGTCLINLKDWSERKQSAEEIIRELEEKAKDIPG
ATIEFFQPPAVPGYGAAGGLDLRLLDKTGTADYKKFEKVNRDFVDALQKRKELTSIFSFY
SASYPQYMLKIDNDVAQQKGVTIQNAMTTLSTLVGSNYETSFIRYGRLYKVMVQAAPQYR
ALPEDILKLYVKNDKEEMVPMSAFMKMEKFYGLNEITRYNMFTSSAIKGAPAPGYSSGDA
IKAIQEVAAQTLPRGYGIDWGGMTKDEVGRGNEAIYIFLICLIFVYMVLAAQYESFMLPF
AVILSLPAGVFGSFLLVKLMGLENNIYAQVGLVMLIGLLGKNAVLIVEFAVQRHRAGDSI
FNAAIEGARTRFRPILMTSFAFIAGLIPLVYATGPGAIGNRTIGTAAAGGMLFGTIFGVI
VVPGLYLIFGKIAEKRKLLKNEEENPLTEEFDHNV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtaatattcttaaaaggcccgtcctttcaattatcatatccgtcctaattgtc
tttttaggaatattgggtatcacccagctccccatcacacagttccctgctatctcgccg
gtgaccgtaaaggtttccgcagagtatccgggtgcgaacggtgagctgttggtaaaaact
gtaatcattccgctggaaagagccatcaacggggtacccggcatgaagtacatgacttct
gacgcgaccaacaccggtgaagcgaacatccagattatattcaacctgggtaccgatcca
aacacggcatccctgaacgtacagaaccgtattgccaaggtgttgaacaaactgccacca
ttggtgatccgtgaaggtctgctcacctccctcgagcaacctgcgatgttgatgtacctg
aacctgtattcaaaagatccaaagacggatgaaaggttcctgtacaactttgccgatatc
aacatcatgcctgagttaacccgcctgcagggtgtgggtagcgcccgcattctcggtaca
cgcgaatactccatgcgtatctggctgaagcctgaccgtatgctggcatacaagatctct
tccgaagaagtaatggaagcactgggtaaccagtcgctcgaagcttctcctggtaaaacc
ggcgaaagctctggtaaaaggtcgcaggcttttgagtatgtaatgaaatactccggtcgt
ttcagtaccaaagaagaatatgaaaacattgttcttcgtgctaatccaaacggcgaattg
ctgcgtctgaaagatgtggctgacattgaatttggtagcttgttctacgatatctattcc
aacctgaatggcagaccttctgccgcgatcgttgtgaaacagttgtatggtagtaatgca
agtaaggtgatcgaagaagtgaaagcgaaactgcaggaactgaagaaaacgactttccct
gctggtatggattacgccatcagttatgacgtatccaagttcctcgacgcctctatcgaa
aaggtaatacacacactggtagaagctttcgtgctggttggtattgtggtatttatcttc
ctgggtgactggcgttctacattgatccctacactggcggtacctgtatcgctggtaggt
acctttatcttcatgggtatgtttggtctgacgatgaacatgatcacgcttttcgcactc
gtactggctatcggtatagtggtggataacgcgattgtggtaatggaggccgtgcacgct
aagatggaagaagaacacctctcgccatatatggctacgaaaaaagtggtacatgaaatt
gcgggtgcggtaatcgcaatcaccttcctgatggtggcggtgttcgtgccggtcgccttc
atgacaggtcctgtgggcgtgttctacagacagtttgctattacaatggcggtatcaatc
gtactctctggtgtggtggcgttgacactgacaccggcattgtgtgcgatgatcctgaaa
aataaccatggtgtaccgaagaaaaagaacctgttgacgaaaggtctcgatgccttcaac
agaagtttcgaaaggctgactggccgctatactggtttgctgaagaagatcgtaaacgta
cgcaccgtaacctggggtatgctgatcggcttctgtctgctcacctggggcatcagttct
actttgcagacgggtttcattccggcagaagaccagggtatgatctatggtatcatccag
gcgcctccgggttcatcactggaacgaacaaatgaaatcgcagagcgcttacagaagatc
gcggagaagatcgacggtatcagttctgtatcagcactggcaggttatgagatcctgaca
gaaggtacgggttccaacgcaggtacctgtctgatcaacctgaaagactggtcagaacgt
aagcaatcggcagaagagatcatccgtgaactggaagaaaaagccaaagatattcccggt
gctaccattgaatttttccagccaccagccgtacctggttatggtgccgcgggcggcctg
gatttacgtctgctggataaaaccggtactgccgattataagaagtttgaaaaggtgaac
agggattttgtggatgcattgcagaaacgtaaagaactgacctccatcttctccttctat
agtgcgtcttatccacagtacatgctgaagatcgataacgatgtagcacagcagaaaggt
gtcactatccagaatgcaatgaccaccctgtctacactggtaggtagtaactacgaaacc
agttttatccgctacggtcgtttgtataaagtaatggtgcaggcggcaccacaatatagg
gcattgccggaagacatcctgaagttgtatgtaaagaatgacaaggaagaaatggtgccg
atgtctgcatttatgaaaatggagaagttctatggactgaacgagatcacccgctataac
atgttcacctcatcagctatcaagggggcgccggctccgggatatagcagtggtgatgcg
atcaaggcgatacaggaagtggccgcgcagacattgccaagaggttatggtattgactgg
ggggggatgacaaaagatgaagtagggcgtggtaatgaagcgatctacatcttcctgatc
tgtctgatattcgtatacatggtactggccgcgcagtacgaaagcttcatgttgccgttt
gcagtgattctgtcactgcctgcaggtgtgtttggttccttcctgttggtgaaattaatg
gggctggaaaataacatttatgcacaggtaggtctggtgatgttgattggtctgttaggt
aaaaatgcggtgctgattgtggagtttgcggtgcagcgacaccgggcaggcgatagcata
tttaatgcggcaatcgaaggtgctagaacgcgtttccgtccgatcctgatgacctccttt
gctttcatcgcaggtttgattccgctggtgtatgcgacaggtccgggggcgatcggtaac
cgtacgattggtacggcagctgcgggtggtatgttattcggtaccatattcggtgtaata
gtagtaccagggctgtacctcatcttcggcaagattgcagagaaacggaagctgttgaag
aatgaagaagagaatccattaactgaagaatttgaccataatgtttaa
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