Chitinophaga sancti: SIO70_18525
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Entry
SIO70_18525 CDS
T09582
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csac
Chitinophaga sancti
Pathway
csac01501
beta-Lactam resistance
csac01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SIO70_18525
01503 Cationic antimicrobial peptide (CAMP) resistance
SIO70_18525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csac02000
]
SIO70_18525
01504 Antimicrobial resistance genes [BR:
csac01504
]
SIO70_18525
Transporters [BR:
csac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SIO70_18525
Antimicrobial resistance genes [BR:
csac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SIO70_18525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
EMC4
PqqF-like_C_4
Motif
Other DBs
NCBI-ProteinID:
WPQ60344
LinkDB
All DBs
Position
4549543..4552608
Genome browser
AA seq
1021 aa
AA seq
DB search
MNISELSLKRPVLATVMNLLIILFGVIGYYFLAVRDYPAIDPPIITVTTSYTGANPDIME
SQISEPLEKQINGIPGIRTISSNSSLGSSVITVEFNLGIDLEAAASDVRDKVSQATKSLP
LDIDAPPVVTKSDANSDPILILAVQSRTKSLMELSDYVDNVLQQQLQTIDQVSSVNIFGD
KSYAMRLWLNEAKMDAYNVAYNDISTALSNENVQLPAGKVYGNNTELTINAIGRLTTEKD
FRDLILREDSTGIVRLSDVARVELGPQIEEQGWKYNGVNAVGLAIIPQPGANNIAIADEF
KKRMEAIRESNKDDIEFSVLVDNTRNIRQSLAEVKETLIIAFALVVLVIFFFFRNWLIAI
RPLIDIPISLIATFFVVYLAGFTINILTLLGIVLATGLVVDDGIVVTENIFRKLEQGMSI
RTAALEGSKEIFFAVISTSLTLAVVFMPVIFLQGFVGRLFREFGVVLATAVLISAFVSLT
ITPVLNVYLNKKDAGHGKFYERTEPFFQGMESGYKRWLEAFMKVRWVAVAIILVCAGMIW
LILSSIQSEIAPLEDRSSIRMTVSLPEGTSYSYTQAVSDKIANYLYDSVPERAFVFARTP
AGSVINSSQPRIGLVPPEERDRSQAEIANDLNRKLKRFNDARIFTIQEQTIAVGSGSKTS
LPIQFILQNQDLDKLKKTIPLFLEEARKDPTFANVDVDLKFTKPTLEVTFDRMKIKDLGL
STNDVISAMQAAFSGGRLAYFIMNGYQYYVIAQLERTERNEPADISHIYVRNASGDKIPL
DAVVKIVTSTSPATLYHFNRFKSSTISASLAPGHTIGDGIKAMQAIADRLLDPTFHTALS
GSSRDYAESSSNIVFAFLLALVLIYLVLAAQFESFIDPFTIMLTVPLALAGALLSLWIFG
QTLNIFSEIGMIMLIGLVTKNGILIVEFTNQKREMGMNKHDAVVEAASQRLRPILMTSLA
TALGALPLAMSLGAASTSRVPLGIVVVGGIVFSLILTLFVIPAIYTFVSSKHKAHIPDVA
E
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatcagaactatcattgaagcggcctgtccttgcgacagtgatgaatctcctg
attatactgtttggggtgattggctactatttcctggcagtgagagactaccctgccatc
gatcctcctattattacagtaaccacttcttatacaggtgcgaacccggatatcatggaa
agccagatctccgaaccactggaaaaacagatcaacggtattcccggtatccgtaccatc
tcttccaatagttccctgggtagcagcgtgatcacggtggagttcaacctgggtatcgac
ctcgaagccgctgccagtgacgtgcgtgacaaggtgagtcaggcaactaaaagtctgccg
ctggacatcgatgcaccaccggttgtcaccaagtccgatgcgaacagtgacccgatcctg
atcctcgctgttcaaagccgtaccaagtcgctcatggaactgagtgactatgtcgataac
gtactacagcaacaattacagaccatcgaccaggtaagctctgtgaacatttttggtgat
aaaagctatgccatgcgcctctggctcaatgaagcaaagatggatgcttacaatgtggcc
tataatgatatcagcacggcccttagcaatgaaaacgtgcagttgcccgccggtaaagta
tatggtaacaacactgaactaactattaacgccattggtcgcctcaccacagaaaaagat
ttccgtgacctcattctccgtgaagacagcacaggcattgttcgtctcagtgatgtagcc
cgtgtggaactgggtccgcagatagaagaacagggctggaaatacaatggtgtaaatgca
gtagggttggcaatcattccacaaccaggcgcgaacaacatcgccattgccgatgagttc
aaaaaacgtatggaggcaatcagggaatccaacaaagacgatattgaattcagtgtgctg
gtagataatacccgcaatatcagacagtcactggccgaagtaaaggaaaccctgatcatt
gcatttgcactcgtggtattagtgatcttcttcttctttagaaactggctgattgccatc
cgtccattaatagatattcccatctcgctgatcgccaccttctttgtggtgtacctcgcg
ggctttaccattaatatattaacgctgttaggtatcgtactggctacaggcctcgtggtg
gatgatggtattgtggtcacggaaaatatcttccgtaaactggagcaggggatgagcatt
cgtacggctgcgctggaaggaagtaaagagatattctttgcggtcatttctacatcattg
acattggccgtggtattcatgccggtgatcttcctgcagggatttgtaggcaggttattc
cgtgaattcggggtcgtacttgccacagcggttttgatctctgcctttgtatccctaacg
attacgccagtattaaatgtgtacctgaataagaaagatgctggtcatggcaagttctat
gaaagaacagaaccatttttccaggggatggaaagtggctacaagcgctggctggaagca
tttatgaaagtgcgctgggtcgcagtggccatcattctggtgtgtgcaggtatgatctgg
ttgatcttaagtagtattcaaagtgaaattgcacctcttgaagacagaagcagtatccgt
atgacggtgagtttacctgaaggtacgagctatagttatacccaggctgtgagtgacaag
atagcgaattacctgtatgactcagtaccggaaagagccttcgtattcgcaagaacacct
gcgggttccgtgatcaatagttctcagccacgtattggcctggtaccgccggaagagcgt
gatcgtagtcaggcagagattgccaatgacctgaacaggaagttgaagcgctttaatgat
gcacgtatcttcacgatacaggaacagacaattgcggtgggttccggttccaagaccagt
ttacccatacagtttatcctgcaaaatcaggatttagataaacttaaaaagacgattccg
ttattccttgaagaagctcgtaaagatccaaccttcgctaacgtagacgtagatctgaaa
tttacaaaacctacattggaagtaacgttcgatcgtatgaagatcaaggatctcggctta
tctacgaatgatgtgatctctgctatgcaggctgctttcagtggtggccgtctggcgtat
ttcatcatgaacggctaccaatattacgtaattgcacaattggaaagaacggagagaaat
gaacctgcggatatcagtcatatctatgtacgcaatgcaagtggagataaaattccattg
gatgcagtcgtgaaaatagtgaccagtacaagtccggctacgttgtatcacttcaaccgt
ttcaagagttccaccatttctgcatccctggcaccgggtcataccattggtgatggcatc
aaagccatgcaggcgatagcagacaggctactggatccaaccttccatacggcattgtcc
ggctccagccgtgactatgcagaaagttcttccaatatcgtatttgccttcctgcttgcg
ttggtattgatctatctggtactcgccgcacagtttgaaagctttatcgatccgttcacc
atcatgctcacggtgccgctggcattggcaggtgcattgctgagcctgtggatctttggc
cagacattgaatatcttctccgaaatcggtatgatcatgttgattggactggtcacgaag
aatggtatcctgatcgtagagtttacaaaccagaagcgtgagatgggtatgaacaaacat
gatgcggtagtagaggcggcatcacaacgtctgcgtccgatcctcatgacatcgctggct
acggcattgggtgcattgcctctggccatgagcctgggagcggcatccacaagtcgtgta
ccattggggatcgtggtagtgggtggtattgtgttctcactgatcctgaccctgttcgtg
attccggcaatatatacctttgtgagtagtaagcacaaggcacacatacctgatgtggca
gaataa
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