Chitinophaga sancti: SIO70_19535
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Entry
SIO70_19535 CDS
T09582
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csac
Chitinophaga sancti
Pathway
csac01501
beta-Lactam resistance
csac01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SIO70_19535
01503 Cationic antimicrobial peptide (CAMP) resistance
SIO70_19535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csac02000
]
SIO70_19535
01504 Antimicrobial resistance genes [BR:
csac01504
]
SIO70_19535
Transporters [BR:
csac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SIO70_19535
Antimicrobial resistance genes [BR:
csac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SIO70_19535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
WPQ60545
LinkDB
All DBs
Position
4771464..4774580
Genome browser
AA seq
1038 aa
AA seq
DB search
MSIAEIAVKRPLLILVIFTVLILFGLECYHSLNYNLLPKMEVPTVTVSTVYAGASASEVE
TSVTKKLEDAFASVEGLDKITSKSQEGVSQVVITFKSGTNIDRAEADIQRKADQAQNDLP
KDIDKPLVNKVNLEEAPVVKAGVTSTLAPRALYDLVDKQLRPILQNVSGVGQVNIIGGDE
REIQVNVDQGKLNAYGITITQVTDAVNNANQSFPAGSIETRDQQVTIQYDANVTSVSQIR
ELIVVQRPGGGSVYLKDVAEVVDATAKATAINHINGLPSIGIQIVKQSDANAVNVSRDVK
KAFTNLEQQYKDSKVKFTISSDQSTYTLRSADAVMEDLVLAVIIVGVVMLAFLHSFRSSM
FVMVALPSSMIPTFIAMYLLGFSLNLMTLMALSLVVGILVDDSIVVLENIYRHLEAGTDR
KQAALDGRNEIGFTAMAITLVDVVVFLPLAMSGGIIGMILREFSLVVVISTLMSLFVSFT
VTPMLASRFGRLEHLTKDTWWGRLNLGFEHIIDVVKENYGKLLKVALHKKRYLLSGVIVL
IIGSIMLVVNGFVGAAFIPSGDQGELMINLELAPDASIYQTNMLTQQVEKHILARPEVDK
VFSSIGFLTGGVAGTGNNSNKAELTVTLVDAKKRNMTAEEFGIMIQRELTASVPGAKVTA
SPTSITGNASTAPIQIAVKGVNLKDVRSVAEQYMKITAGVPGTQFVQLSVKDPKPQIEVK
LDREKMTLLGLNASQVGGALQNAFSGNDKSKFKQSGNEYDILVSLDRFNRSDINNVRNLS
FTNNDGQTFVLSQFAEVIEGIGESVLERSDRLNSITVNANVAGRPTGTVATEIKEKVASV
KLPEGVSIEYLGDVKNQGDAFGSLGLALITAILLVYLIMVALYESVIYPFVVLFSIPVAL
IGALLALALSMETLNIFSIIGMIMLLGLVSKNAILIVDFTNHLKEKGAKVEDALVEAGEE
RLRPILMTTLAMILGMLPIAMATGAGSEVKNGMAWVIIGGLTSSMILTLFVVPAMYLIID
KLKMRLQKKKQPAYHEAH
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatagcagaaattgccgtaaaacggcctctattaatacttgtaatatttacggtg
ctgatacttttcggactggaatgttatcatagcctgaattataacctgctgcccaagatg
gaagtgccgactgttacagtgagcacagtctatgcaggtgcttccgcttctgaagtggaa
acatccgtgacaaagaaactggaagatgcctttgcttcggtagaagggttggacaagatc
acctccaaatcacaggaaggggtatcacaggtagtcattaccttcaagagtggtaccaac
attgaccgggcagaagcagatatccagcgtaaagcagatcaggcacagaatgacctgcca
aaggatatcgataaacctttggtaaataaagtaaacctggaagaagcccctgtggtgaag
gccggtgttacttctacactcgctccccgcgcattgtatgacttagtcgataagcaactg
cgccccatcttacagaacgtatccggtgtagggcaggtaaacatcatcggtggtgatgaa
cgtgagatacaggtaaacgtagatcagggtaaactcaatgcctacggtatcaccatcaca
caggtgacggatgctgtgaacaatgcgaaccagtcattccctgcaggtagtatcgagaca
cgggaccagcaggtgaccatccagtacgatgcgaacgtgacttcagtgtcacagatccgt
gagctgatcgtggtacaacgtccgggtggcggcagcgtatatttaaaagatgtagctgaa
gtagtggatgctacagccaaagcgacggctatcaatcacatcaatgggctaccttctatt
ggtatacagatcgtgaagcaatcagatgcgaatgcagtgaatgtaagccgtgatgtaaag
aaagcatttaccaatcttgaacaacagtataaagacagcaaagtaaaattcacgatatcc
tcagaccagtctacctacacccttcgctctgcggatgctgtaatggaagacctggtgctg
gcagtgatcattgtaggggttgtgatgctggctttcctgcatagcttccgtagttctatg
tttgtgatggtggcattgccatcttccatgatccctacatttatcgccatgtacctgctg
ggcttctcgctgaacctgatgacgctgatggcgctttcgctggtggtaggtatcctggtg
gatgactccattgtggtgctggaaaacatttaccgtcacctggaagcaggaacggaccga
aaacaggcagccctggatggtcgtaatgaaattggctttacagccatggcgatcacactg
gtggatgtggtggtgttcctgccactggctatgtccggtgggatcatcggtatgatctta
agagagttttcattagtagtggtgatatctacgttaatgagcctgttcgtatccttcacg
gtaacgcctatgttagcaagccgtttcggcagattggaacaccttactaaagatacctgg
tggggtagactcaacctgggattcgaacatatcattgatgtggtgaaagagaattatggt
aaattattgaaggttgcactgcataaaaaacggtacttgttatccggtgtgatcgttctg
attataggttctataatgctggttgtcaatggatttgtgggcgctgcttttattccttca
ggagaccagggcgagctgatgatcaacctggaattggctccggatgcgtctatttaccag
acaaatatgctgacccaacaagtggagaaacacatactggccagaccggaagtagacaag
gttttttccagtatcggtttcctgacaggtggtgtggccgggacaggtaataacagtaac
aaggcggagctgacagtgacgcttgtagatgcaaagaaacgaaacatgacagcggaggaa
ttcggtatcatgatacagcgtgagttgactgccagcgtacctggtgcgaaagtaacggca
tcaccgacttctatcactggcaatgccagcacagcccctatccagattgcagtgaaaggg
gtgaacctgaaagacgtgcggagtgtggcggagcaatacatgaagattacagcgggtgtg
ccgggtacacagttcgtacagctctcagtaaaagatccgaagccacagatagaggtgaaa
ctggatagagagaaaatgacgttgttagggctcaatgccagccaggttgggggtgcattg
cagaatgcattcagtggaaacgataagagcaaattcaagcaatcaggcaatgaatacgat
attcttgtaagcctggatcgctttaacagatcagatatcaataatgtaagaaatctttca
tttacgaataatgatgggcaaacatttgtgctgagtcagtttgccgaagtaatagaagga
ataggtgaaagcgtactggaacgcagcgaccggctcaattctatcacggtgaatgcaaac
gtggctggcagaccaacaggtacggtggctacagagatcaaagaaaaagtagccagcgta
aaattgcccgaaggtgtgtcaatagaataccttggtgatgtaaagaaccagggagatgct
tttggtagcctgggactggcattgatcacagcgatcctgctggtatacctgatcatggtg
gcgctgtatgaaagtgtgatctatccatttgtagtattgttctcaattccggtggcattg
atcggcgcactgctggcactggccctgagtatggagacgctgaatatcttctctattatt
ggtatgattatgttgttaggtcttgtgtcaaagaatgcgatcctgatcgtggactttacc
aatcatttaaaagagaagggtgctaaagtagaagatgcgctggtagaagcgggagaggag
cgtctgcgcccgatcctgatgacgacactggctatgattcttggtatgttgccgattgcg
atggccacgggagcgggttctgaggtcaagaacggaatggcgtgggtgattattggtggt
ttgaccagttctatgatcctgacgttgtttgtagtaccagcgatgtacctgatcattgat
aaactgaaaatgcgtttacaaaagaaaaaacaacccgcgtaccatgaagctcattag
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