Chitinophaga sancti: SIO70_20770
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Entry
SIO70_20770 CDS
T09582
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csac
Chitinophaga sancti
Pathway
csac01501
beta-Lactam resistance
csac01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SIO70_20770
01503 Cationic antimicrobial peptide (CAMP) resistance
SIO70_20770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csac02000
]
SIO70_20770
01504 Antimicrobial resistance genes [BR:
csac01504
]
SIO70_20770
Transporters [BR:
csac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SIO70_20770
Antimicrobial resistance genes [BR:
csac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SIO70_20770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Pox_C7_F8A
Motif
Other DBs
NCBI-ProteinID:
WPQ60791
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All DBs
Position
5091844..5095047
Genome browser
AA seq
1067 aa
AA seq
DB search
MSLVSTALKKPISVVVLTLGVFLFSILAVINIPIDIFPKLNQPTIYVIEPYGGMSAQQME
GFFATRLQDQFLYVNGIKNISSKNIQGLSMIKLTFYEGTDMGEASAQVALQVSRAMNFFP
PGAAPPQVIRFDASSLPVGELVFSSPTRSLKDIYDMATTRIRPMFATVPGLSASPPFGAN
ARSVVVNVNPDRLRSYNLSADQVVEAIARNNAMSPSGNIRINNKMFLTTINSLEEQVTDF
GDIPVTTNGNSTVFVKDIATVSDGADVTVDYALVNGKRSVYMPVVKTPDASTWEVVKQLK
AKLPEMQNLLPEDTKITYEFDQSVAVINAVKGLMTEGILGAVLTGLMVLLFLRDLRSCMV
VVITIPIAILSAVFGLYLSGQTINLMTLSGLALAIGVLVDQATVTIENIHQHLEMGKPKK
QAIYEACEEIAFPLLLILLCILAVFAPSFIMSGVPKAMFLPLSLSIGFAMIASFFVAQTL
VPVISNWWLKAERYQHAHAGLALDKEEVDEVNDHMQEQQLHPEKLTGFEKFKAWFMRVLE
GLGKRSSLVIGLYLIIAFGAAGTAYVVIGKDLMPHINVGQFQLRIKEPDGTRLERTEEKV
HQVLNIIDQVTDGNVEISSAYVGLIPSSYGSSNLYVFNAGTHEAVLQVNLNEDYKVNIEA
LKDTLRERIAAKFPQLRVSFEPIDMTEKIMAQGASTPIEVRVAGKDMQQIQKYATMLTNR
LKNISFLRDVQIVQPLHYPVIKINVDRFKVAQMGLNVYQVARSVTASTSSSRFSEKNQWL
DEKGAYTYQVQVQIPEYSMQAISDLQEIPLVRGQARPVLGDVASFSTSEVPGEYDRSGPR
RYLTVSANISNIDLGAATRAVQHEIDEMGPPPRGLIADVQGSSSLLTDTLNGLQNGLMLA
VMVIFLLLAANYQSFRLSFVVLVTVPAVIAGALLMLLLTGSTLNLQSYMGMIMSTGVSVA
NAILIVTNAEKLRIDYRDAYKAGIVSAGIRLRPILMTSLAMIAGMVPMASGMGESGDQTA
PLGRAVIGGLIASTIAALFILPLVYARMQRRTTFEAVSLMPEAIEES
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtcattagtctctactgccttaaaaaagccaatctcggttgtcgtactgacactgggc
gtgttccttttttctatactggcagttatcaatattcccatcgatatttttccgaagctg
aatcagccgaccatctatgtgatagaaccatatggaggtatgtctgcccagcagatggaa
ggtttctttgccacccgcttacaggatcagtttctgtatgtgaatggtattaaaaatatc
agcagtaaaaatatccagggtctcagcatgatcaagctcaccttctacgaagggactgac
atgggagaggcttcggcacaggtagcgctgcaggtaagccgtgctatgaacttctttccc
ccgggtgctgcaccaccacaggtgattcgttttgatgcgtcttcactacctgtgggtgaa
ctggtattcagttctcctacacgttcgctgaaagatatttatgatatggcgaccacccgt
atcaggccgatgtttgccactgtaccgggtttgtctgcttcgccaccatttggtgcgaat
gcccgttctgtagtggtgaatgtaaaccctgaccggctgcgtagttacaacctgagtgca
gaccaggtggtggaggccattgcgcgtaacaacgcgatgagcccttccgggaatatccgt
attaataataaaatgttcctcactaccatcaactcactggaagagcaggtgactgatttc
ggagatattcctgtaacgacgaatggtaactccactgtgtttgtaaaggatattgcgacg
gtatcagatggtgcggatgtaacggtggattatgcactggtgaatggaaaacgttccgta
tacatgccggttgtaaagaccccggatgcgtctacctgggaagtggtaaaacaactgaag
gcaaagttgcccgagatgcagaacctcttgccggaagatacaaaaatcacctatgaattt
gaccagtcagtagccgtgatcaatgccgtgaaaggcctgatgacagagggtatactgggt
gcggtgctgacaggtctgatggtattgctctttctgcgtgatttaaggagttgtatggta
gtggtgatcacgatacctatagcaattttatccgcggtgtttggtttatatctcagcgga
caaaccattaacctgatgaccttatcgggattggcgctggccatcggggtactcgtggat
caggccacggtgacgattgagaacattcaccagcacctggaaatgggcaagcccaagaag
caggcgatatatgaggcttgtgaagagatcgcgtttccattgctgctgatcctgttgtgt
atccttgccgtgtttgcgccttcctttatcatgtcgggtgtgccgaaggccatgttcctg
ccactgtcgttgtccattggttttgccatgatagcttcgttctttgtcgcgcagacattg
gtaccggttatttccaactggtggctcaaggcggagaggtaccagcatgcacatgcggga
ctggcattggataaggaagaggtggatgaagtgaatgatcatatgcaagagcagcaattg
catcctgaaaagctgactggctttgagaaattcaaagcgtggtttatgcgggtgttggaa
gggcttggaaaacgttcatcactggtgattggattgtatttaataattgcctttggcgca
gcgggtactgcctatgtggtgataggtaaagacctgatgccacatattaatgttgggcaa
tttcagcttcgtatcaaagagccggatggtacccggctggaaagaacagaagaaaaggta
caccaggtgctgaacatcattgatcaggttacggatggtaatgtggaaatcagttctgct
tatgtagggctgatcccttccagctatggttccagtaacctgtatgtatttaatgcaggt
acacacgaagccgtgttgcaggtgaacctgaatgaggattataaagtaaacatagaagcg
ctgaaagatacgctgcgtgaacggatcgcagcgaagtttccgcagttgcgggtatccttt
gagccgattgatatgacggagaagattatggcgcagggagcttcaacaccgatagaagta
agagtggcgggtaaggatatgcagcagatccagaagtatgcgacaatgcttacaaacagg
ttgaagaatatttcgtttttgcgggatgtacagatagtacaacccctgcattatcctgtg
atcaagatcaatgtagacaggttcaaagtggcgcagatggggttgaatgtgtaccaggta
gcccggtcagtaacagcgtctacatccagtagccggttctctgaaaagaaccagtggctg
gatgagaaaggtgcttacacttaccaggtgcaggtgcagatcccggaatatagtatgcag
gcgatcagtgacctgcaggaaattccactggtacgcgggcaggcgagaccagtattgggt
gatgtggcgagctttagtacgagcgaagtgccgggggaatatgatcgttctggtccccgt
cgttacctgacggtgagtgcgaatatttccaacattgacctgggggctgctactagagcg
gtgcagcatgaaatcgatgagatgggacctccgccacgtggtttgatagcggatgtacag
ggtagttcaagtttgctgacagatacattgaatggtttgcagaatgggttgatgctggcg
gtcatggtgatattccttttgctggcggctaattatcagtcgttcagactgagctttgtg
gtattggtaacggtgccagcggtaatagcaggggcattgctgatgttgttgcttacaggg
tctacgctgaatttgcagtcttatatggggatgattatgtctacaggtgtatctgtggcg
aatgcgatcctgattgtaacgaatgcggagaagttgcggattgattacagggatgcgtat
aaggcggggattgtgagtgcgggaattcgtttgcgtccgattttgatgacgagtcttgca
atgattgcgggtatggtaccgatggcatcaggtatgggagagtcaggagatcagacagcg
ccattggggagagcggtgattgggggattgattgcttcgacgatagcggcgttgttcata
ttgccgttggtgtatgcacgtatgcagcggaggacgacttttgaggcggtttcgctgatg
ccggaggcgatagaggagagttag
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