Chitinophaga sancti: SIO70_23515
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Entry
SIO70_23515 CDS
T09582
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csac
Chitinophaga sancti
Pathway
csac01501
beta-Lactam resistance
csac01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SIO70_23515
01503 Cationic antimicrobial peptide (CAMP) resistance
SIO70_23515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csac02000
]
SIO70_23515
01504 Antimicrobial resistance genes [BR:
csac01504
]
SIO70_23515
Transporters [BR:
csac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SIO70_23515
Antimicrobial resistance genes [BR:
csac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SIO70_23515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
OEP
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WPQ61330
LinkDB
All DBs
Position
5798533..5803125
Genome browser
AA seq
1530 aa
AA seq
DB search
MFDTFIKRPVLSLVISLIIVLLGLLALFSLPVTQFPDIVPPSVTVTAKYTGANAEVCAKA
VATPLERAINGVPGMTYMSSVSSNTGVTLISVSFAVGTDPDQAAVNVQNRVATILDELPE
EVIKAGVSTEKEVNSMLLYLNIMSEDSTLNEKFIYNFADINVLQELKRIDGVGFAEIMGA
KEYAMRVWLKPDRMLAYSVSADEVVEAIRKQNIEAAPGKTGEAADNDPQVLQYILRYTGK
FFTPEQYKNIIIRANADGSVLQLKEVADVEFGSLSYGMVSKTDGKPSASIMLKQRPGSNA
QDVIANVKSRMAELKETSFPPGMTYNFNYDVSRFLDASIHEVLRTLVEAFLLVFIVVFLF
IQDFRSTLIPALAVPVALIGTLAFMQILGFSINLLTLFALVLAIGIVVDNAIVVVEAVHV
KMHDQHMAPMQATLAAMREISGALVAITLVMSAVFIPVAFLSGPVGVFYRQFSLTMAIAI
VISGINAVTLTPALCAIMLKNHHAAGKPRTWLQKFFDKFNYRYNKTEKKYQHLVGYIAGR
RMITIGMLALFFIATWGISAILPGGFIPAEDQGMIYVNVTTPAGATVSRTEAVLDEVQKV
AANLEETESVSTLAGYSLVSEVAGASYGMGMVNLKPWEERNRSVKEIIAQLEKNTRHIND
ARIEFFPPPTVPGFGNSSGFELRVLDKSGSGDLRQTADVTTAFINALKERKEIGSAFTSF
DPDFPQYMIHVDQAMAAKKGVSIDNAMSTLQTLLGSYYASNFIRFGQMYKVMVQASPRYR
TKPEDILHLYVKNDKGEMVPYSNFISLERVFGPEQLTRYNMYTAAMVNGDAAPGYSSGDA
IKAIEEVAKQKLPRGFSYEWSGMTREQILSGNQAVYIFAIVLLFVYLLLAAQYESFLLPL
PVILSLPAGIFGAFLTLKLAGLENNIYAQVALVMLVGLLGKNAILIVEFAILKHKHGASI
LESAKEGAVSRLRPILMTSFAFIAGLIPLCIANGAGAMGNRSIGTAAAGGMLIGTIFGVV
VIPGLYVLFAGIAEKRRKPHVVKAHHVVTVLVLGVLMSSCYTPKAVEYPEAPVVPAMAEV
KSVPGGAVTNASNEAKDSTATTPLTYQKFFADPYLRQLLDTALYNNTDIQLALQRVEMTK
AQLLVASKAWLPAVNAAIDAGVERYGDYTMNGVGNYDTNLSQNIDNNQKIPNPTPNYFIG
LKSAWEIDLWGKLKNAKKAAQQRMLASEQGRRLVTMQLIANVAGMYYQLLALDNERTVLQ
RNIVLQESALATVRIQQEAGRATLLAVQQFHAQLLNTQSLMMGIQQQTIRLENQLNALLG
RFPQAIPRDTSLLTATLPPYASEGMPATWLSHRPDIQQAALELGAAKADVAAAKAAFLPS
LNINPYVGFNSFRANLLFNTGSVAYGLLGGVTAPIFNKKQLAAQYQVNSATALSAFYNYR
QRVIDGYQEVMTALSQLHNGQEAFRLKAAEVTMLKDGVSTANDLYMTGYANYLEVITAQK
SVLEAELALANTRKELFLGTIELYRALGGM
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatacatttatcaagcggcccgtgctgtcgctagttatctcattaatcatagtc
ctgctgggcctactggcactattctctctgccagtcacccaatttccagacatcgtccct
ccatccgttaccgttaccgccaaatacacgggtgcgaatgcggaagtatgtgccaaagcc
gtggccactccactggaaagagccatcaatggcgtaccgggtatgacctacatgtcgtct
gtatccagcaataccggtgtcacattgatctccgtttctttcgccgttggtacagatccg
gaccaggccgcagtaaacgtacagaaccgtgtagccaccatcctcgatgaattacctgaa
gaggtgatcaaagccggtgtgagcacggaaaaagaagtgaacagtatgctgctctacctc
aacatcatgagcgaagacagcacgctcaatgaaaaattcatttacaactttgcagacatc
aatgtattgcaggagttaaaacgtattgatggcgttggctttgcagagatcatgggcgcg
aaggaatacgccatgcgcgtatggctgaaacccgatcgtatgctggcttacagcgtgagt
gcggacgaagtggtggaagccatccgtaaacaaaacattgaagcagccccaggtaaaaca
ggggaagccgctgacaatgatccacaggtattacaatacatcttacgctataccggaaaa
ttctttacaccagaacaatacaaaaacatcatcatccgcgccaatgccgacggctctgta
ttacagctgaaagaagtggcggacgtggaatttggctcactcagttatggcatggtatcc
aaaacagatgggaagccttctgcttctatcatgctcaaacaacgtcctggttccaatgca
caggatgtaattgcgaatgtaaaaagccgtatggctgaactgaaggaaacctcttttcca
ccgggcatgacgtacaacttcaactacgacgtatcccgtttcctggatgcctctatacat
gaggtattacgtacactggtagaagcattcctcttagtgtttatcgtggtattcctcttt
atacaggacttccgctctacccttatacctgcgctggcagtgccggtagcattgatcggt
acattggcatttatgcaaattttggggttctcgatcaacctgctcaccctgtttgcatta
gtactggccattggtattgtggtcgataacgccattgtggtggtggaagcggtgcatgta
aaaatgcatgatcagcacatggctcccatgcaggcaacactggcagccatgcgggaaata
agcggggcactggtagcgattacattggtcatgtctgccgtatttataccagtagcattc
ctctcagggcctgtgggcgtgttctacaggcagttctccctcaccatggcgattgcaatt
gtaatatctggtatcaatgccgtaaccctcacgcctgccctgtgtgccattatgctcaaa
aatcaccatgcagcgggcaagccgcgtacatggctacaaaagttcttcgataaatttaac
tatcgttataataagacagaaaagaaataccagcacctggtaggatatattgcaggcagg
cgcatgatcactatcgggatgctggcactgtttttcattgctacctggggtataagtgcc
attctgcccggaggctttattccggctgaagatcagggtatgatctatgtgaacgtcaca
acccctgcaggtgccaccgtgtccagaacggaagctgtgctggatgaggtacagaaagta
gcagcgaacctggaagaaacagaatcagtatctacactggcagggtatagtctggtgagt
gaagtagcgggtgccagctatggtatgggtatggtgaacctgaaaccctgggaggaaaga
aaccgttcggtgaaagagatcatagcacaattagagaaaaatacccgccacattaatgat
gcaagaattgagttcttcccacctccgaccgtaccgggttttggtaactcgagtggtttt
gaattgagggtgctggacaagagtggtagcggtgacttacgacaaacagcggatgtaacg
acggcattcatcaacgcattgaaagaaaggaaagaaatcggaagtgcatttaccagcttt
gatcctgactttccacaatatatgattcatgtggatcaggccatggcagcgaagaagggc
gtgagtatcgacaatgccatgagcacgttgcaaacattgctgggtagttattatgcctct
aactttattcgattcggacagatgtacaaggtgatggtacaggcatcgccccgttataga
accaagccggaagatatcctgcatttatatgtcaagaatgataaaggcgagatggtgcct
tattccaactttataagtctcgaaagagtgtttggacctgagcagctcacacgttataat
atgtatacagcggcgatggtgaacggtgatgcggcgccaggatatagtagtggtgatgct
atcaaagccattgaagaagtggcgaagcagaaactgccacgtggatttagttatgagtgg
agtgggatgacgagagaacagatcctttctggtaaccaggcagtgtacatttttgcgatt
gttttgttgtttgtgtatttgttactggctgcacagtatgagagtttcttactgccattg
ccagtgatattatcactaccggcgggcatcttcggggctttccttacgttgaaactggcg
gggttggagaataatatttatgcgcaggtggcattggtgatgctggtaggtttgttaggc
aagaatgcgatattgatagtagagtttgcgatcctgaaacataagcatggggcttcgata
ttggaaagtgcgaaggaaggtgcggtgtctcgtttgcggccgattttgatgacttcgttt
gcgtttattgcggggttgatccctttgtgtattgcgaatggagcaggtgcgatggggaat
aggtcgattggtacggcggcagcgggtggtatgttgataggaacgatattcggtgtggtg
gtgattccggggttgtatgtgctgtttgcaggtatagcagagaagaggaggaagccgcat
gtggtgaaggcgcatcatgtggtgacggtgttggtattaggggtgttgatgagtagttgt
tatacgccgaaggctgtggagtatcctgaggcgcctgtggtgcctgcgatggctgaggtg
aagtcggtgcctgggggggctgtaacaaatgcatcaaatgaagcaaaagattcaacagct
acaaccccacttacttaccaaaagttttttgcagacccatatctcaggcaattactggat
actgccttatataataatacggatatacagttggccttgcagcgggtggaaatgacaaag
gcacagttgctggtagccagcaaagcatggttgccggctgtgaatgcagctatagatgca
ggtgtagaaagatatggtgattataccatgaatggcgtgggtaactatgataccaacctt
tcacagaatatagacaataatcaaaagataccgaatccaaccccgaattactttattggc
ttgaagagtgcgtgggaaatagatctgtggggtaagttgaagaatgctaagaaagcggca
cagcagcggatgctggcgagtgagcagggaagacgactggtgaccatgcagttgatagcg
aatgtagcgggcatgtattaccagctattggcgttggataatgagcgaactgtattgcaa
cgcaatattgtcctgcaggaatcagcattggctacagtacgtattcagcaggaagcggga
agagcgacattgctggcagtgcagcaatttcatgcgcagttgttgaatacacagagtttg
atgatggggattcagcaacagacaataaggttagaaaatcagttgaatgccttgctaggc
cggtttccgcaggcgataccgagagatacttctttgctgacagcgacattgcctccttat
gccagtgaaggaatgccagcgacatggttatctcatcgtccggatattcagcaggcagca
ttggaattgggtgcagctaaagcggatgtggcagcagcgaaggcggcgtttttgccatcg
ttgaatatcaatccttatgtagggtttaatagtttcagggcgaatttattatttaatacg
gggtcagtggcttatgggttattagggggtgtgacggcgccgatattcaataagaagcag
ctggcagcacagtaccaggtgaattcggcaacggcattgagcgcattttataattacaga
caaagagtgatagatgggtaccaggaagtgatgacggcgctgagccagttgcataatggc
caggaggcattcaggctgaaagcagccgaggtaacgatgttgaaggatggggtttcgacg
gcgaatgacctttatatgacggggtatgcgaactatctggaggtgattacagcgcagaag
agtgtgttggaggcagagttggcgctggcgaataccaggaaggagttgtttttggggacg
attgagttgtatagggctttaggaggtatgtag
DBGET
integrated database retrieval system
