Chitinophaga sancti: SIO70_24120
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Entry
SIO70_24120 CDS
T09582
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
csac
Chitinophaga sancti
Pathway
csac01501
beta-Lactam resistance
csac01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SIO70_24120
01503 Cationic antimicrobial peptide (CAMP) resistance
SIO70_24120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csac02000
]
SIO70_24120
01504 Antimicrobial resistance genes [BR:
csac01504
]
SIO70_24120
Transporters [BR:
csac02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SIO70_24120
Antimicrobial resistance genes [BR:
csac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SIO70_24120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WPQ61451
LinkDB
All DBs
Position
complement(5958559..5961702)
Genome browser
AA seq
1047 aa
AA seq
DB search
MLKIFIKRPVLSTVISVIIVILGVLAYLGLPVTQYPEIAPPTVKVSATYTGAGAEVIQRN
VIVPLEEQINGVEGMTYMTSTATNDGDATITVYFKLGTNSDINAVNVQNRVQRATNLLPA
EVTKAGVTVEKQQSSNLLIFALKSNNPSYDQTFLSNYANINLIPEIKRINGVGSVVSFGT
KDYSMRVWLKPDVMATYGITPADVNNALAEQNFDAAPGKFGENSDQVFQYTIKYTGRLID
TTQFGDIIMRSTADGQVLRLKDIARLEMGSLTYSSTMNTDDQPATVIAISQTAGSNAQAI
IKDAITTLDKASASFPEGVSYIPLLNANDFLSASIEKVIHTLIEAYILVFIVVFIFLQDF
RSTLIPGISVLVSIIGTFACLSLFGFTINLLTLFALVLAIGIVVDDAIVVVEAVHAKLDE
GYQSAYNASVDAMSELGGTIVAITLVMAAVFVPVSFISGSSGVFFKQFGLTLASAIVISA
VNALTLSPALCALFLKPHEEHNGTSKNLLQRFYMSFNTGFDALKGKYQKSIGFLNRKKWI
IPSALVLFTVLLVFFMKTSPGGFVPNEDQGTIFADISLPPGTSLEKTTQVANIVDNMAKN
IPEVANRAKITGQSIINGTGSNFGLLIFKLKPWDERKGVKVDDVIGRLFGMTAGIKDAKI
IFFAPPTVPGFGNSSGFTIELQDKTGGSVENFSKVAGGFLGAINQRPEILYAATGFNPNY
PQYLMKINVAKTKEAGILPSDLMATMQGYFGGIYASNFNQFGKQYRVMIQADAKYRSNSQ
SLNNVYVRNASGNMAPVSEFVTLTSVNGPQSLSRFNLYNNISVIGSPKPGFSSGDALAAV
RETAAQTLPAGYTFDYSGLSREEVNAGGQTVFIYILCIVFVFFLLSALYESYIIPFAVLL
SLPAGLFGTYLFARIMGIDNNIYMQISVVMLIGLLAKNAILIVEYAVARREKGMTIVNAA
IEAATARLRPILMTSLAFIVGLMPLMFSSGVGAAGNRSIGTGAVGGMLAGTIFGVFIIPV
LYIIFQTLQEKFSGKKKPGEVVIPALD
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagatattcataaaaagaccggttttatctactgtaatatcggtaatcattgta
atattgggagtattagcctatttagggctacccgttacacaataccctgaaatcgccccg
ccaacagttaaggtatcagctacatataccggtgccggcgcagaagtaattcaaagaaac
gtcattgtaccactggaagaacagataaatggtgtggaaggaatgacctacatgacttcc
accgccactaatgatggtgatgctactatcactgtatacttcaaacttggtacaaactct
gatataaacgccgtaaacgtgcagaacagggtgcaaagggccactaatttactgcctgcc
gaagtaaccaaagcaggagtaaccgtagagaagcagcaaagtagtaaccttctcatcttt
gcacttaaaagtaataacccgtcatatgaccagacatttttaagcaattatgccaacatc
aatcttataccggaaattaagcggataaacggcgtgggtagtgtagtttcatttggtaca
aaggactattccatgcgtgtttggctgaagcccgatgtaatggcaacctatggcataact
cctgcagatgtgaacaacgcacttgctgaacaaaattttgatgctgcgcccggtaaattt
ggagaaaacagcgaccaggtttttcaatacaccattaaatataccggccggttgatcgat
accacgcagtttggtgacattatcatgcgttctactgctgatggccaggtattacgatta
aaggatatcgccaggcttgaaatgggttccctcacctattcctctactatgaatactgat
gatcagcccgcaactgttattgccataagccaaacggccggatccaatgcccaggccatt
attaaagacgccataaccacactggataaagcttccgcatcttttccagaaggtgtaagt
tatatacccctgttgaacgcgaatgactttttaagtgcatctattgaaaaagtgatacac
actttaatagaagcctatattttggttttcattgttgtttttatttttctccaggatttt
cgctccacgcttataccgggtatatcagtattggtgtctatcatcggtacgtttgcctgt
ctcagcttgtttggctttacaattaacctgctaacactctttgctttggtgctggccata
ggtattgtggtagatgatgctatagtagtcgtcgaggcggtccacgccaagctagatgaa
ggttatcaatcagcatacaatgcatctgttgatgccatgtctgaattgggcggaaccatc
gtagcaattacattggtcatggccgccgtgtttgttccggtttcttttatcagcggcagc
tcgggagtattttttaaacagtttggtttgacccttgcttctgccattgtaatttcggcg
gtcaatgccctgacgctaagccccgcattgtgcgccctgtttttgaaaccgcatgaagaa
cataatggaaccagcaaaaacctgctgcaaaggttttatatgtcttttaataccggattt
gatgctttaaagggcaaataccaaaagtcaataggcttcttaaaccgtaaaaaatggatc
attccgtctgccctagtcttatttactgtattactggttttcttcatgaaaacatcgcca
ggcggttttgtgcccaatgaagatcagggaaccatcttcgctgatatcagcttacctccg
ggtacctctcttgaaaaaaccactcaggttgccaatatagtagacaatatggcgaagaat
attcctgaagttgctaaccgggcaaaaataaccgggcaaagcatcatcaatggtaccggt
agcaatttcggattgctcatatttaagctaaaaccgtgggatgaaagaaagggggtaaaa
gttgatgatgtgattggcaggttatttggcatgactgccggaataaaagatgcaaaaatc
attttctttgcaccgcctaccgtaccagggttcggtaactcaagtgggtttaccattgaa
ttgcaggataaaaccgggggcagcgtagaaaatttcagcaaagttgccggtggcttcctg
ggagcaattaatcaacgtccggaaattttatatgccgctactgggtttaatcctaactac
ccccaatatttaatgaaaataaacgtagccaaaacaaaagaagccggcattttacccagc
gatctgatggcaactatgcaaggttatttcggtggtatatatgcttctaactttaaccag
tttggtaaacaataccgggttatgatacaggctgatgccaaataccggagcaattcacag
agtctaaataatgtgtatgtcagaaatgcatctggtaacatggcgcctgtatcagaattt
gttaccctcacttctgttaatggaccacaaagcctgtcaaggttcaacctatataataat
atatcagttatcggcagtcctaaacccgggtttagcagcggcgatgcacttgctgctgtt
agagaaactgcggcccaaaccctgcctgccggttacacttttgactactcaggtttatcg
cgtgaagaggtaaatgctggtggacaaacagtgttcatctatatactttgtatagtgttt
gtattctttttactgagcgctctttatgaaagttatattataccgtttgctgtgctgtta
tcccttcctgcaggcttgtttggcacttacctttttgcaaggatcatggggatagacaac
aacatatacatgcaaatatctgtagtgatgctgattggtttactcgctaaaaatgctatc
ctgatagttgaatatgctgttgcaaggcgagagaaaggtatgacaattgtaaatgcggcc
attgaagctgccacagcacgtttgcgtcctattttaatgacatcacttgcgtttattgta
ggcctcatgccgctgatgttctcatctggtgttggtgctgccggcaatcgctctattggc
acaggtgctgtaggtggcatgttggcaggaacaatattcggtgtatttattatacccgtc
ctttacatcatttttcaaacattacaggaaaaattcagcggaaaaaagaaaccaggtgag
gtggtaattcctgcattagattaa
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