Cololabis saira (Pacific saury): 133419734
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Entry
133419734 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133419734
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133419734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
LRR_6
NOD2_WH
PRY
SPRY
LRR_4
AFG1_ATPase
DUF2704
Motif
Other DBs
NCBI-GeneID:
133419734
NCBI-ProteinID:
XP_061565122
LinkDB
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Position
19:4076733..4091308
Genome browser
AA seq
1230 aa
AA seq
DB search
MDQCEDREEGVPPSKTSLCGEHESRSKAQRNQPGPGPGHGPKPIPKPRLKLKPGPGPESG
PSCLSLKSDQSKEYVINFKGDQRSAVKRVHQKRESLEHEPSCLSLKSDHSKEYVINFKGE
QQSSSERIHQKRDSLEHEPSCLSFKSDQSKEYVINFKGDQQSSSKRVDQQSSEPHSGPSV
QQHQTQLDSIFLLLEDNIVLFVKNELKKIQRGLSPDYPESLEHLLQGEDEEQRRSSREAF
VKITVNFLRRMKHEELAEHLQRCTFAEVCKERLKSKLKEKYQCVSEGIVKAGNPTLLKQI
YTELYITEGGTGEVNNEHEVRQIEAASRKPDRAETTIRQEDIFKLPPGRDEPIRTVMTKG
VAGIGKTVLTQKFGLDWAESKVNQDIQLLLPFTFRELNVLKERKFSLVELVHHFFTETRG
MCSFEEFQVVFIFDGLDESRLPLDFHNNEVLTDVTESTSVDVLLTNLIRGNLLPSARLWI
TTRPAAANQIPPECVSMVTEVRGFTNPQKEEYFRKRFREEEQTSRIISHIKTSRSLHIMC
HIPVFCWITATVLEKVLESREGGGLPKTLTEMYIHFLVVQAKLKKVKYDGGAETDPHWSP
ESRKMVESLGKLAFEQLQKGNLIFYEPDLRECGIDVREASVYSGVFTQIFREESSLYQDQ
VFCFIHLTVQEFLAALHVHLTFMKSGVNLLEEQRNTETQLYQNLLEEQRNTETDLYQSAV
DKALQSPNGHLDLFLRFLLGLSLETNQTLLRGLLEPEQRSSQNNPETVAYIKKEISEDLS
AEKSINLFHCLNELNDGSLVEEVQQSLRLGRLSTAKLSPAQWSALVFILLSSEDLEVFDL
KKYSASEEVLRRLLPVVKASKKVVLSGCNLSEDICADLSSVLSSQSSSLTELDLSNNHLQ
DSGLKKLCPGLESPHCHLESLRLSDCNLSEDICADLSSVLSSQSSSLTELDLSNNHLQDS
GLKKLCPGLESPHCHLESLRLSGCLISEEGCVSLVSALSSNPSHLRELDLSYNHPGESGR
KLLSAGLEDPRWRLDTLRVEPAGQRWLTPGLRKYSCQLTIDTNTVNNNIKLSDNNRKMMF
VKEDQSYPDHPDRFDYWRQLLCREVLTGRCYWEVQWSGDVSVSVSYRRISRKGGSVDCLF
GRNNHSWRLDCYDDGLYNVCYNKRVTTSSSSSSVSDRVAVYVDVPAGTLSFYSVSSDRLF
HLHTFNTTFTKPLYPGFWFRPGSGSSVSLC
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggaccagtgtgaggacagagaggagggagtccctccctctaaaacctctctgtgtggg
gaacatgagagtcggagcaaagctcagaggaatcaacctggacctggacctggacatgga
cctaaacctatacctaaacctagacttaaacttaaacctggacctggacctgaatccgga
cccagctgtttgtccttgaagagcgaccagtcaaaggaatatgttattaactttaaagga
gaccaacgttctgctgtaaagagggtccatcagaaaagagaatctcttgaacatgaaccc
agctgtttgtccttgaagagcgaccactcaaaggaatatgttattaactttaaaggagag
caacagtcgtcttcagagaggatccatcagaaaagagactctcttgaacatgaacccagc
tgtttgtccttcaagagcgaccagtcaaaggaatatgttattaactttaaaggagaccaa
cagtcttcttcaaagagagtggaccagcagagctcagagcctcacagcggtccgtctgtc
cagcagcatcagacacagctggactccatctttctgctgctggaggacaacattgtcctg
tttgtaaagaacgagctgaagaagatccagaggggtctgagtccagattacccagaatcc
ctagagcatttgttgcagggtgaggatgaagagcagaggaggagcagcagagaggcgttt
gtgaagatcacagtgaacttcctgaggagaatgaagcacgaggagctggctgagcatctg
cagagatgtacttttgctgaagtttgtaaagagcggctgaagtctaagctgaaggagaag
taccagtgtgtgtctgaggggattgttaaagcaggaaacccaacccttctgaagcagatc
tacacagagctctacatcacagagggagggactggagaggtcaacaatgaacatgaagtc
agacagattgaagcagcatccagaaaaccagacagagcagaaacaaccatcagacaggaa
gacatctttaaactcccacctggaagagatgaaccaatcagaacagtgatgacgaaggga
gtggccggcatcgggaaaacagtcctaacacagaagttcggtctggactgggctgaaagc
aaagtcaaccaggacatccagttactgcttccattcaccttcagagagctgaatgtgctg
aaagagagaaagttcagcttggtggaacttgttcatcacttcttcactgaaaccagagga
atgtgcagctttgaagagtttcaggtcgtgttcatctttgacggtctggatgagagtcga
cttcctctggacttccacaacaatgaggtcctgactgatgttacagagtccacctcagtg
gatgtgctgctgacaaacctcatcagggggaacctgcttccttctgctcgtctctggatc
accacacgacccgcagcagccaatcagatccctcctgagtgtgtctccatggtaacagag
gtcagagggttcactaacccacagaaggaggaatacttcaggaagaggttcagagaagag
gagcagaccagcaggatcatctcccacatcaagacatcacggagcctccacatcatgtgc
cacatcccagtcttctgctggatcactgctacggtcctggagaaagtcctggaatccaga
gagggaggggggctgcccaagaccctgactgagatgtacatccacttcctggtggtccag
gccaaactgaagaaggtcaagtatgatggaggagctgagacggatccacactggagtcca
gagagcaggaagatggtggagtctctgggaaaactggcttttgagcagctgcagaaagga
aacctgatcttctatgaaccagacctgagagagtgtggcatcgatgtcagagaggcttca
gtgtactcaggagtgttcacccagatctttagagaggagagcagcctgtaccaggaccag
gtcttctgcttcatccatctgactgttcaggagtttctggctgctcttcatgtccatctg
accttcatgaagtctggagtcaacctgctggaggaacaaagaaacacagagactcagctc
tatcagaacctgctggaggaacaaagaaacacagagactgacctctatcagagtgctgtg
gacaaggccttacagagtccaaacggacacctggacttgttcctccgcttcctcctgggt
ctttcactggagaccaatcagactctcctacgaggtctgttggaaccagaacaaagaagt
tcacagaacaatccggaaacagttgcatacatcaagaaggagatcagtgaggatctgtct
gcagagaaaagcatcaacctgttccactgtctgaatgaactgaacgatggttctctggtg
gaggaggtccaacagtccctgaggttaggacgtctctccacagctaaactgtctcctgct
cagtggtcagctctggtcttcatcttactgtcatcagaagatctggaggtgtttgacctg
aagaaatactcagcttcagaggaggttctacggaggttgctgccggtggtcaaagcctcc
aagaaagttgtgttgagtggttgtaacctctcagaggacatctgtgcagatctgtcctca
gttctcagctctcagtcctccagtctgacagaactggacctgagtaacaaccacctgcag
gattcaggactaaagaagctgtgccctggactggagagtccacactgtcacctggagtct
ctcaggttgagtgactgtaatctctcagaggacatctgtgcagatctgtcctcagttctc
agctctcagtcctccagtctgacagaactggacctgagtaacaaccacctgcaggattca
ggactaaagaagctgtgccctggactggagagtccacactgtcacctggagtctctcagg
ctgtcaggctgtctgatctcagaggaaggctgtgtttctctggtctcagctctgagctcc
aacccctcccatctgagagagctggacctgagctacaaccatccaggagagtcaggaagg
aagcttttgtctgctggactggaggatccccgctggagactggacactctcagggtggag
cctgctggacaacgatggttgacaccaggtctgaggaagtattcctgtcaactcaccatc
gacacaaacacagtcaacaacaacatcaaactgtctgacaacaacaggaagatgatgttt
gtgaaggaggatcagtcatatcctgatcatccagacaggtttgattactggcgtcaactg
ctgtgtagagaagttctgacgggtcgctgttactgggaggtccagtggagcggagatgtt
tctgtatcagtgagttacagaagaatcagcaggaaaggaggctctgttgactgtttgttt
ggaaggaacaatcattcctggaggctggactgttatgatgatggtctgtacaatgtctgt
tacaataagagagtaacaacttcctcctcctcttcctcagtctctgacagagtagcagtg
tatgtggacgttcctgctggaactctgtccttctacagcgtctcctctgacagactgttc
cacctccacaccttcaacaccacattcactaaacctctctatcctggattctggttccgg
cctggttctggttcttcagtgtctctgtgttga
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